RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 RUNX1Q01196 453 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 FAM27E3Q08E93 113 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 C10orf91Q5T1B1 145 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 MBNL2Q5VZF2 373 aaKnown RBP12.29□□□□□ -0.44
RFTN1-203ENST00000432519 TMEM182Q6ZP80 229 aaPredicted RBP12.29□□□□□ -0.44
RFTN1-203ENST00000432519 BEND4Q6ZU67 534 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 MOB1BQ7L9L4 216 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 ASCL5Q7RTU5 278 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 OR13A1Q8NGR1 328 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 LYPD6BQ8NI32 183 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 LRRC29Q8WV35 223 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 SPIN2AQ99865 258 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 SPIN2BQ9BPZ2 258 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 ZFP57Q9NU63 452 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 CACNG5Q9UF02 275 aa12.29□□□□□ -0.44
RFTN1-203ENST00000432519 DSCAMO60469 2012 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.28□□□□□ -0.44
RFTN1-203ENST00000432519 TRIM77I1YAP6 450 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 WRBO00258 174 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 ACAA1P09110 424 aaPredicted RBP12.28□□□□□ -0.44
RFTN1-203ENST00000432519 SEC11BP0C7V7 166 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 PPP1CCP36873 323 aaKnown RBP12.28□□□□□ -0.44
RFTN1-203ENST00000432519 CBLN2Q8IUK8 224 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 IQCF2Q8IXL9 164 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 ZNF808Q8N4W9 903 aaPredicted RBP12.28□□□□□ -0.44
RFTN1-203ENST00000432519 SCRT1Q9BWW7 348 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 CACFD1Q9UGQ2 172 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 GLS2Q9UI32 602 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 IGHV3OR15-7A0A075B7D8 119 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 BORCS7-ASMTA0A0B4J1R7 106 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 TMEM30CPA0ZSE6 113 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 DEFB108AA8MXU0 73 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 CD5P06127 495 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 ATP6V0CP27449 155 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 F2RL1P55085 397 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 BRWD1-AS2P59051 145 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 FAM201AQ5SY85 155 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 PLEKHF2Q9H8W4 249 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 FAM212BQ9NTI7 297 aaPredicted RBP12.28□□□□□ -0.44
RFTN1-203ENST00000432519 PKDREJQ9NTG1 2253 aa12.28□□□□□ -0.44
RFTN1-203ENST00000432519 TAGLNQ01995 201 aaKnown RBP12.27□□□□□ -0.44
RFTN1-203ENST00000432519 SWI5Q1ZZU3 235 aa12.27□□□□□ -0.44
RFTN1-203ENST00000432519 BTNL3Q6UXE8 466 aa12.27□□□□□ -0.44
RFTN1-203ENST00000432519 SNIP1Q8TAD8 396 aaKnown RBP12.27□□□□□ -0.44
RFTN1-203ENST00000432519 IL22RA2Q969J5 263 aa12.27□□□□□ -0.44
RFTN1-203ENST00000432519 OR2D2Q9H210 308 aa12.27□□□□□ -0.44
RFTN1-203ENST00000432519 IGF2RP11717 2491 aa12.27□□□□□ -0.44
RFTN1-203ENST00000432519 PTPRQQ9UMZ3 2332 aa12.27□□□□□ -0.45
RFTN1-203ENST00000432519 DUXBA0A1W2PPF3 345 aa12.27□□□□□ -0.45
RFTN1-203ENST00000432519 SFTA3P0C7M3 94 aa12.27□□□□□ -0.45
RFTN1-203ENST00000432519 IAPPP10997 89 aa12.27□□□□□ -0.45
RFTN1-203ENST00000432519 BMP5P22003 454 aa12.27□□□□□ -0.45
RFTN1-203ENST00000432519 NFYBP25208 207 aa12.27□□□□□ -0.45
RFTN1-203ENST00000432519 VAMP2P63027 116 aa12.27□□□□□ -0.45
RFTN1-203ENST00000432519 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.45
RFTN1-203ENST00000432519 EDDM3AQ14507 147 aa12.27□□□□□ -0.45
RFTN1-203ENST00000432519 LTC4SQ16873 150 aa12.27□□□□□ -0.45
RFTN1-203ENST00000432519 UTF1Q5T230 341 aa12.27□□□□□ -0.45
RFTN1-203ENST00000432519 ETV3LQ6ZN32 361 aa12.27□□□□□ -0.45
RFTN1-203ENST00000432519 IGKV1D-17A0A075B6S4 117 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 PLA2G5P39877 138 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 KRBOX4Q5JUW0 171 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 C1orf185Q5T7R7 199 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 RNASE11Q8TAA1 199 aaKnown RBP12.26□□□□□ -0.45
RFTN1-203ENST00000432519 GALMQ96C23 342 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 RBMXL1Q96E39 390 aaKnown RBP12.26□□□□□ -0.45
RFTN1-203ENST00000432519 ABHD17AQ96GS6 310 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 LRFN3Q9BTN0 628 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 CARHSP1Q9Y2V2 147 aaKnown RBP12.26□□□□□ -0.45
RFTN1-203ENST00000432519 ATP6V1G2-DDX39BF2Z307 99 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 IGHV3-13P01766 116 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 IGHV3-7P01780 117 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 PVALBP20472 110 aaPredicted RBP12.26□□□□□ -0.45
RFTN1-203ENST00000432519 IL2RGP31785 369 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 CAMLGP49069 296 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 SLC35E4Q6ICL7 350 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 GCSAMQ8N6F7 178 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 ABHD14BQ96IU4 210 aa12.26□□□□□ -0.45
RFTN1-203ENST00000432519 A0A1B0GWJ7 208 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 PRH1P02810 166 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 SELLP14151 372 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 CCL20P78556 96 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 ARL16Q0P5N6 197 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 FIP1L1Q6UN15 594 aaKnown RBP12.25□□□□□ -0.45
RFTN1-203ENST00000432519 SVBPQ8N300 66 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 FAM213BQ8TBF2 198 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 OR2V2Q96R30 315 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 C19orf12Q9NSK7 152 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 K7N7A8 449 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 GPR37O15354 613 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 SPRY3O43610 288 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 S100GP29377 79 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 SNCAP37840 140 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 TIMM23BQ5SRD1 257 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 TGIF2LYQ8IUE0 185 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 ZNRF1Q8ND25 227 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 AKR1E2Q96JD6 320 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 SEC11CQ9BY50 192 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 KCNIP1Q9NZI2 227 aa12.25□□□□□ -0.45
RFTN1-203ENST00000432519 A0A1B0GU03 582 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms