RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 MBD6Q96DN6 1003 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 SEC22CQ9BRL7 303 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 BPESC1Q9GZL8 116 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 OR51J1Q9H342 316 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 IDI2-AS1Q9NZ38 188 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 YPEL1O60688 119 aa15.02□□□□□ -0.01
HMGN1-206ENST00000431390 TRAPPC2P0DI81 140 aa15.02□□□□□ -0.01
HMGN1-206ENST00000431390 TRAPPC2BP0DI82 140 aa15.02□□□□□ -0.01
HMGN1-206ENST00000431390 PI3P19957 117 aa15.02□□□□□ -0.01
HMGN1-206ENST00000431390 LOXL3P58215 753 aa15.02□□□□□ -0.01
HMGN1-206ENST00000431390 GNMTQ14749 295 aa15.02□□□□□ -0.01
HMGN1-206ENST00000431390 SECTM1Q8WVN6 248 aa15.02□□□□□ -0.01
HMGN1-206ENST00000431390 FAM168AQ92567 244 aa15.02□□□□□ -0.01
HMGN1-206ENST00000431390 YPEL2Q96QA6 119 aa15.02□□□□□ -0.01
HMGN1-206ENST00000431390 PIMREGQ9BSJ6 248 aa15.02□□□□□ -0.01
HMGN1-206ENST00000431390 SLC5A7Q9GZV3 580 aa15.02□□□□□ -0.01
HMGN1-206ENST00000431390 RGS11O94810 467 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 AKR1C4P17516 323 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 PPP1CCP36873 323 aaKnown RBP15.01□□□□□ -0.01
HMGN1-206ENST00000431390 GNB2P62879 340 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 PPP1R1AQ13522 171 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 ABCA11PQ4W5N1 156 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 MORN2Q502X0 79 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 LY6G6FQ5SQ64 297 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 CLEC2AQ6UVW9 174 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 LYG2Q86SG7 212 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 C10orf105Q8TEF2 133 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 ZNF431Q8TF32 576 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-206ENST00000431390 EDARADDQ8WWZ3 215 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 SSBP3Q9BWW4 388 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-206ENST00000431390 GFOD1Q9NXC2 390 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 GNG12Q9UBI6 72 aa15.01□□□□□ -0.01
HMGN1-206ENST00000431390 IGHV3-43A0A0B4J1X8 118 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 A0A1W2PPH5 198 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 HMX3A6NHT5 357 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 GPR31O00270 319 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 ITGB1BP1O14713 200 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 IGHV2-5P01817 119 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 IGHV3-43DP0DP04 118 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 OMGP23515 440 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 GNRHRP30968 328 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 DSCR9P59020 149 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 RND3P61587 244 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 RRAS2P62070 204 aaPredicted RBP15□□□□□ -0.01
HMGN1-206ENST00000431390 DHRS2Q13268 280 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 DEFB113Q30KQ7 82 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 ESCO2Q56NI9 601 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 HEPN1Q6WQI6 88 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 LDLRAD3Q86YD5 345 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 CCDC71LQ8N9Z2 235 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 OR52B4Q8NGK2 314 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 PERPQ96FX8 193 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 NARFLQ9H6Q4 476 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 SLC2A9Q9NRM0 540 aa15□□□□□ -0.01
HMGN1-206ENST00000431390 RPUSD1Q9UJJ7 312 aaKnown RBP15□□□□□ -0.01
HMGN1-206ENST00000431390 YLPM1P49750 1951 aaKnown RBP14.99□□□□□ -0.01
HMGN1-206ENST00000431390 C9orf170A2RU37 121 aa14.99□□□□□ -0.01
HMGN1-206ENST00000431390 HLA-AP01891 365 aaKnown RBP14.99□□□□□ -0.01
HMGN1-206ENST00000431390 CCL3L1P16619 93 aa14.99□□□□□ -0.01
HMGN1-206ENST00000431390 DLX6P56179 175 aa14.99□□□□□ -0.01
HMGN1-206ENST00000431390 PIGPP57054 158 aa14.99□□□□□ -0.01
HMGN1-206ENST00000431390 LTC4SQ16873 150 aa14.99□□□□□ -0.01
HMGN1-206ENST00000431390 CD276Q5ZPR3 534 aa14.99□□□□□ -0.01
HMGN1-206ENST00000431390 C11orf88Q6PI97 169 aa14.99□□□□□ -0.01
HMGN1-206ENST00000431390 ZNF818PQ6ZRF7 136 aa14.99□□□□□ -0.01
HMGN1-206ENST00000431390 RAB39BQ96DA2 213 aa14.99□□□□□ -0.01
HMGN1-206ENST00000431390 AKR1E2Q96JD6 320 aa14.99□□□□□ -0.01
HMGN1-206ENST00000431390 PARP12Q9H0J9 701 aaKnown RBP14.99□□□□□ -0.01
HMGN1-206ENST00000431390 MED28Q9H204 178 aa14.99□□□□□ -0.01
HMGN1-206ENST00000431390 BEX4Q9NWD9 120 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-206ENST00000431390 RBM7Q9Y580 266 aaKnown RBP14.99□□□□□ -0.01
HMGN1-206ENST00000431390 CRYM-AS1A6NIL9 109 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 VWC2LB2RUY7 222 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 PFDN1O60925 122 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 SFT2D2O95562 160 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 OR8U9P0C7N5 309 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 MSMO1Q15800 293 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 SGPP2Q8IWX5 399 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 CMTM1Q8IZ96 169 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 LY6G5BQ8NDX9 201 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 BVESQ8NE79 360 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 OR8U1Q8NH10 309 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 C18orf12Q96KH6 178 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 CCL28Q9NRJ3 127 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 MALRD1Q5VYJ5 2156 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 SSNA1O43805 119 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 SLC22A5O76082 557 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 DUS4LO95620 317 aaKnown RBP14.98□□□□□ -0.01
HMGN1-206ENST00000431390 RBP4P02753 201 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 VAMP1P23763 118 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 S100GP29377 79 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 SUPT4H1P63272 117 aaKnown RBP14.98□□□□□ -0.01
HMGN1-206ENST00000431390 Q3ZCU0 254 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 PHLDA2Q53GA4 152 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 PRAMEF5Q5TYX0 476 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 FAM53AQ6NSI3 398 aaPredicted RBP14.98□□□□□ -0.01
HMGN1-206ENST00000431390 ZNF645Q8N7E2 425 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 CLDND2Q8NHS1 167 aa14.98□□□□□ -0.01
HMGN1-206ENST00000431390 RTN4IP1Q8WWV3 396 aaPredicted RBP14.98□□□□□ -0.01
HMGN1-206ENST00000431390 DMRTB1Q96MA1 342 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms