RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 RGNQ15493 299 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 S100A7L2Q5SY68 101 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 TMEM78Q5T7P6 136 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 FBXL22Q6P050 247 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 DTX1Q86Y01 620 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 B3GALNT2Q8NCR0 500 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 C16orf52Q8NHV5 167 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 SYNPRQ8TBG9 265 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 SCGB1C1Q8TD33 95 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 RNF128Q8TEB7 428 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 OR4C12Q96R67 309 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 MARCH5Q9NX47 278 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-203ENST00000430976 GCC2Q8IWJ2 1684 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 DIP2AQ14689 1571 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 RIC1Q4ADV7 1423 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 M0QZQ0 153 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 BUB3O43684 328 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 GALR3O60755 368 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-203ENST00000430976 APOMO95445 188 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 FGF6P10767 208 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 STC1P52823 247 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 MYBPHQ13203 477 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 SLC25A52Q3SY17 297 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 TMEM52BQ4KMG9 183 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 STUMQ69YW2 141 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 CD300LDQ6UXZ3 194 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 ACY3Q96HD9 319 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 SLC25A19Q9HC21 320 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 DEPPQ9NTK1 212 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 RNF186Q9NXI6 227 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 CACFD1Q9UGQ2 172 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 HS3ST3B1Q9Y662 390 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 A2ML1A8K2U0 1454 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 TRAV18A0A075B6X5 111 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 A0A1W2PPK0 400 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 C7orf66A4D0T2 115 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 FGF10O15520 208 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-203ENST00000430976 LMX1BO60663 402 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 ATP6V0CP27449 155 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 VDAC2P45880 294 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-203ENST00000430976 GZMMP51124 257 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 P2RX1P51575 399 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 TMEM50BP56557 158 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 TRIP6Q15654 476 aaKnown RBP4.59□□□□□ -1.67
PTPN4-203ENST00000430976 MIDNQ504T8 468 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 LRRC25Q8N386 305 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-203ENST00000430976 OR1J2Q8NGS2 313 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 C2orf48Q96LS8 159 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 PNRC2Q9NPJ4 139 aaKnown RBP4.59□□□□□ -1.67
PTPN4-203ENST00000430976 PARP11Q9NR21 331 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 TMEM106BQ9NUM4 274 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 ACER3Q9NUN7 267 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 IL17CQ9P0M4 197 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 FTSJ1Q9UET6 329 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 LAMC1P11047 1609 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 COL16A1Q07092 1604 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-203ENST00000430976 DOCK9Q9BZ29 2069 aa4.59□□□□□ -1.67
PTPN4-203ENST00000430976 CASKIN1Q8WXD9 1431 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 CNTNAP5Q8WYK1 1306 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 TRAV5A0A0B4J249 113 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 FAM240AA0A1B0GVK7 77 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 HMSDA8MTL9 139 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 HYPMO75409 117 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 MYOD1P15172 320 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 CRYBB3P26998 211 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 GRNP28799 593 aaKnown RBP4.59□□□□□ -1.68
PTPN4-203ENST00000430976 MPGP29372 298 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 DGCR2P98153 550 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 PSG6Q00889 435 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 LINC00303Q3SY05 128 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 PAQR6Q6TCH4 344 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 APOOLQ6UXV4 268 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 RSPO2Q6UXX9 243 aaPredicted RBP4.59□□□□□ -1.68
PTPN4-203ENST00000430976 NR2C2APQ86WQ0 139 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 TBL1YQ9BQ87 522 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 PRDM14Q9GZV8 571 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 FLVCR1Q9Y5Y0 555 aa4.59□□□□□ -1.68
PTPN4-203ENST00000430976 A0A1W2PPV9 198 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 WTIPA6NIX2 430 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-203ENST00000430976 H7C1H1 209 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 NPIPB7O75200 414 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 IRF1P10914 325 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 PSMB1P20618 241 aaKnown RBP4.58□□□□□ -1.68
PTPN4-203ENST00000430976 DAPP51397 102 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 TMEM255AQ5JRV8 349 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 PAGE3Q5JUK9 113 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 STPG3Q8N7X2 389 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 OR5K2Q8NHB8 316 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 OSR1Q8TAX0 266 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-203ENST00000430976 FGF11Q92914 225 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 PMCHL2Q9BQD1 86 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 HILPDAQ9Y5L2 63 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 DUOX2Q9NRD8 1548 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 A0A0J9YY10 115 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 A0A0U1RQF3 1178 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 DDTLA6NHG4 134 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-203ENST00000430976 TMEM212A6NML5 194 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 ZG16O60844 167 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 LEPP41159 167 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms