RNA–Protein interactions for RNA: ENST00000430086.1

CCDC88A-206, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 3

Gene CCDC88A, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-206ENST00000430086 LINC01551Q86U37 167 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 DOLPP1Q86YN1 238 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 TMEM86BQ8N661 226 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 UBL4BQ8N7F7 174 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 OR8A1Q8NGG7 326 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 GALMQ96C23 342 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 SFRP2Q96HF1 295 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 OR2A5Q96R48 311 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 KLF6Q99612 283 aaPredicted RBP3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 MED18Q9BUE0 208 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 RPP21Q9H633 154 aaKnown RBP3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 TAS2R7Q9NYW3 318 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 VPREB3Q9UKI3 123 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 CARHSP1Q9Y2V2 147 aaKnown RBP3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 CAMSAP1Q5T5Y3 1602 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 C2orf16Q68DN1 1984 aa3.39□□□□□ -1.87
CCDC88A-206ENST00000430086 NOS1P29475 1434 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 NPATQ14207 1427 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 IGKV2D-24A0A075B6R9 120 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 A0A1W2PP18 115 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 A8MWL6 223 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 B4DEV8 164 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 STK16O75716 305 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ATG12O94817 140 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 WISP3O95389 354 aaPredicted RBP3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 RPL5P46777 297 aaKnown RBP3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 LINC00315P59091 139 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 GABARAPL2P60520 117 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ATP5G2Q06055 141 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 PMAIP1Q13794 54 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ABCA11PQ4W5N1 156 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 TMEM205Q6UW68 189 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ATP5L2Q7Z4Y8 100 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 C20orf196Q8IYI0 205 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 H1FOOQ8IZA3 346 aaPredicted RBP3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ORMDL3Q8N138 153 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 TMEM256Q8N2U0 113 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ZNF676Q8N7Q3 588 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ZDHHC22Q8N966 263 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 OR4X1Q8NH49 305 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 FAM57AQ8TBR7 257 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 C18orf15Q96N68 181 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 CDX2Q99626 313 aaPredicted RBP3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 GNB1LQ9BYB4 327 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ZNF436Q9C0F3 470 aaPredicted RBP3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 C6orf62Q9GZU0 229 aaPredicted RBP3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ZNF430Q9H8G1 570 aaPredicted RBP3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 PLEKHF2Q9H8W4 249 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 CYTL1Q9NRR1 136 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 SMPXQ9UHP9 88 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ENOPH1Q9UHY7 261 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ANGPT4Q9Y264 503 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 WASHC3Q9Y3C0 194 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ZNF706Q9Y5V0 76 aaPredicted RBP3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 PBRM1Q86U86 1689 aa3.38□□□□□ -1.87
CCDC88A-206ENST00000430086 ADAMTS13Q76LX8 1427 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 IGLV4-69A0A075B6H9 119 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 IGHV7-4-1A0A0J9YVY3 117 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 OR6C6A6NF89 314 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 TMX2-CTNND1H3BSU7 103 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 BPY2O14599 106 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 PDE6DO43924 150 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 APCSP02743 223 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 TTRP02766 147 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 HMGN1P05114 100 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 FBP1P09467 338 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 OR56A5P0C7T3 313 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 OR13C7P0DN81 318 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 PSMB3P49720 205 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 GZMMP51124 257 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 CCR6P51684 374 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 MNAT1P51948 309 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 CRYBA4P53673 196 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 TAS2R41P59536 307 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 PSG4Q00888 419 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 TMEM267Q0VDI3 215 aaPredicted RBP3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 JOSD1Q15040 202 aaPredicted RBP3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 MESTQ5EB52 335 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 FAM201AQ5SY85 155 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 TEX36Q5VZQ5 186 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 SMARCD3Q6STE5 483 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 C5orf46Q6UWT4 87 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 Q6ZRU5 148 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 TMEM144Q7Z5S9 345 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 SAXO1Q8IYX7 474 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 ZNF555Q8NEP9 628 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 OR8S1Q8NH09 359 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 OR13C6PQ8NH95 151 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 TMEM158Q8WZ71 300 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 APOBEC3DQ96AK3 386 aaPredicted RBP3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 CPNE2Q96FN4 548 aaPredicted RBP3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 THTPAQ9BU02 230 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 VCXQ9H320 206 aa3.37□□□□□ -1.87
CCDC88A-206ENST00000430086 SCN2AQ99250 2005 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 IGHV3-72A0A0B4J1Y9 119 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 FUOMA2VDF0 154 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 OR4C46A6NHA9 309 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 FAM159BA6NKW6 160 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 PPP5D1E7EU14 171 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms