RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SSTR5P35346 364 aa9.74□□□□□ -0.85
UBR4-207ENST00000425413 MSMPQ1L6U9 139 aa9.74□□□□□ -0.85
UBR4-207ENST00000425413 C10orf91Q5T1B1 145 aa9.74□□□□□ -0.85
UBR4-207ENST00000425413 BHLHA15Q7RTS1 189 aaPredicted RBP9.74□□□□□ -0.85
UBR4-207ENST00000425413 DRAM1Q8N682 238 aa9.74□□□□□ -0.85
UBR4-207ENST00000425413 CABLES2Q9BTV7 478 aa9.74□□□□□ -0.85
UBR4-207ENST00000425413 PLEKHF2Q9H8W4 249 aa9.74□□□□□ -0.85
UBR4-207ENST00000425413 TREM2Q9NZC2 230 aa9.74□□□□□ -0.85
UBR4-207ENST00000425413 CACFD1Q9UGQ2 172 aa9.74□□□□□ -0.85
UBR4-207ENST00000425413 SH3BGRL2Q9UJC5 107 aa9.74□□□□□ -0.85
UBR4-207ENST00000425413 IGHV3OR15-7A0A075B7D8 119 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 M0R036 132 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 EIF3GO75821 320 aaKnown RBP eCLIP9.73□□□□□ -0.85
UBR4-207ENST00000425413 DAOP14920 347 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 RPS16P62249 146 aaKnown RBP9.73□□□□□ -0.85
UBR4-207ENST00000425413 ZNF816Q0VGE8 651 aaPredicted RBP9.73□□□□□ -0.85
UBR4-207ENST00000425413 ZNF146Q15072 292 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 ZNF718Q3SXZ3 478 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 SPRNQ5BIV9 151 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 WDR82Q6UXN9 313 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 ODF3L1Q8IXM7 274 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 LINC00518Q8N0U6 118 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 GINS3Q9BRX5 216 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 OR2D2Q9H210 308 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 ZNF71Q9NQZ8 489 aaPredicted RBP9.73□□□□□ -0.85
UBR4-207ENST00000425413 LYRM2Q9NU23 88 aaPredicted RBP9.73□□□□□ -0.85
UBR4-207ENST00000425413 KCNIP1Q9NZI2 227 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 PKDREJQ9NTG1 2253 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 TRBV6-6A0A0A6YYG2 114 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 SEC11BP0C7V7 166 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 ID3Q02535 119 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 COL10A1Q03692 680 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 SLC25A24Q6NUK1 477 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 LRRC29Q8WV35 223 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 C14orf79Q96F83 325 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 CXXC4Q9H2H0 198 aa9.73□□□□□ -0.85
UBR4-207ENST00000425413 RAMP3O60896 148 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 KRASP01116 189 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 IGKV1-5P01602 117 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 RAB13P51153 203 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 DVL1P1P54792 670 aaPredicted RBP9.72□□□□□ -0.85
UBR4-207ENST00000425413 PAX9P55771 341 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 CCL20P78556 96 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 AVPI1Q5T686 147 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 FIP1L1Q6UN15 594 aaKnown RBP9.72□□□□□ -0.85
UBR4-207ENST00000425413 IQCF2Q8IXL9 164 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 S100PBPQ96BU1 408 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 RBMXL1Q96E39 390 aaKnown RBP9.72□□□□□ -0.85
UBR4-207ENST00000425413 C11orf1Q9H5F2 150 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 PLSCR4Q9NRQ2 329 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 TMEM30CPA0ZSE6 113 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 OR5H1A6NKK0 313 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 HBZP02008 142 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 METTL15P1P0C7V9 234 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 OR13C7P0DN81 318 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 MDH2P40926 338 aaKnown RBP9.72□□□□□ -0.85
UBR4-207ENST00000425413 GUK1Q16774 197 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 ZNF585BQ52M93 769 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 FAM201AQ5SY85 155 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 COQ2Q96H96 371 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 ABHD14BQ96IU4 210 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 CLCC1Q96S66 551 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 SLC25A31Q9H0C2 315 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 ARV1Q9H2C2 271 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 DOCK11Q5JSL3 2073 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 AHRRA9YTQ3 701 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 J3QW42 95 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 CD5P06127 495 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 PLA2G5P39877 138 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 ACP7Q6ZNF0 438 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 PRSS33Q8NF86 280 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 CD300LFQ8TDQ1 290 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 ISOC2Q96AB3 205 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 GALMQ96C23 342 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 RARRES2Q99969 163 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 IFT22Q9H7X7 185 aa9.72□□□□□ -0.85
UBR4-207ENST00000425413 TLN1Q9Y490 2541 aaKnown RBP9.71□□□□□ -0.85
UBR4-207ENST00000425413 SPRY3O43610 288 aa9.71□□□□□ -0.85
UBR4-207ENST00000425413 NDUFA2O43678 99 aa9.71□□□□□ -0.85
UBR4-207ENST00000425413 HEXAP06865 529 aa9.71□□□□□ -0.85
UBR4-207ENST00000425413 EGR1P18146 543 aa9.71□□□□□ -0.85
UBR4-207ENST00000425413 SNCAP37840 140 aa9.71□□□□□ -0.85
UBR4-207ENST00000425413 RPL30P62888 115 aaKnown RBP9.71□□□□□ -0.85
UBR4-207ENST00000425413 SPINK9Q5DT21 86 aa9.71□□□□□ -0.85
UBR4-207ENST00000425413 KRBOX4Q5JUW0 171 aa9.71□□□□□ -0.85
UBR4-207ENST00000425413 ZNF474Q6S9Z5 364 aaPredicted RBP9.71□□□□□ -0.85
UBR4-207ENST00000425413 MOB1BQ7L9L4 216 aa9.71□□□□□ -0.85
UBR4-207ENST00000425413 OR13A1Q8NGR1 328 aa9.71□□□□□ -0.85
UBR4-207ENST00000425413 FAM234AQ9H0X4 552 aa9.71□□□□□ -0.85
UBR4-207ENST00000425413 RNF115Q9Y4L5 304 aa9.71□□□□□ -0.85
UBR4-207ENST00000425413 TMEM210A6NLX4 147 aa9.71□□□□□ -0.86
UBR4-207ENST00000425413 BMP5P22003 454 aa9.71□□□□□ -0.86
UBR4-207ENST00000425413 G6PCP35575 357 aa9.71□□□□□ -0.86
UBR4-207ENST00000425413 ZNF266Q14584 549 aa9.71□□□□□ -0.86
UBR4-207ENST00000425413 THNSL2Q86YJ6 484 aa9.71□□□□□ -0.86
UBR4-207ENST00000425413 ZNF295-AS1Q8N0V1 137 aa9.71□□□□□ -0.86
UBR4-207ENST00000425413 FAM215AQ9Y5M1 114 aa9.71□□□□□ -0.86
UBR4-207ENST00000425413 KALRNO60229 2985 aa9.71□□□□□ -0.86
UBR4-207ENST00000425413 ZGRF1Q86YA3 2104 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms