RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SLC35G6P0C7Q6 338 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 C8orf89P0DMQ9 161 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 OR13C7P0DN81 318 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 GTF2F2P13984 249 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 SLC2A5P22732 501 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 CD1CP29017 333 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 AGTR1P30556 359 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 CEACAM3P40198 252 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 RBM34P42696 430 aaKnown RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 FOXA1P55317 472 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 SNRPGP62308 76 aaKnown RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 HERV-K104P63124 156 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 HBA1P69905 142 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TGM3Q08188 693 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 ZP4Q12836 540 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 FOXF1Q12946 379 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 ELOBQ15370 118 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TSNQ15631 228 aaKnown RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM249Q2WGJ8 235 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 PLPPR5Q32ZL2 321 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 LINC00303Q3SY05 128 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TDRG1Q3Y452 100 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF789Q5FWF6 425 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF678Q5SXM1 525 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 LDLRAD2Q5SZI1 272 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 AADACL3Q5VUY0 350 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 SAMD13Q5VXD3 122 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 CST9Q5W186 159 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 GLT8D1Q68CQ7 371 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 HBMQ6B0K9 141 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 FAM71E1Q6IPT2 247 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 EIF5AL1Q6IS14 154 aaKnown RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 REEP3Q6NUK4 255 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TNFAIP8L2Q6P589 184 aaPredicted RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 PRSS54Q6PEW0 395 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 CD164L2Q6UWJ8 174 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 CXCL17Q6UXB2 119 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 CLEC18BQ6UXF7 455 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF705AQ6ZN79 300 aaPredicted RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 ACOT7LQ6ZUV0 252 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 SLC25A26Q70HW3 274 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 PID1Q7Z2X4 250 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 FAM220AQ7Z4H9 259 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 ABHD12BQ7Z5M8 362 aaPredicted RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 GKN2Q86XP6 184 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 GTPBP8Q8N3Z3 284 aaPredicted RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TOMM5Q8N4H5 51 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 SLC35G3Q8N808 338 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 MRPL43Q8N983 215 aaKnown RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 Q8N9W7 124 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 C20orf203Q8NBC4 194 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 BHLHE23Q8NDY6 225 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM161BQ8NDZ6 487 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 NOXO1Q8NFA2 376 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 OR4E2Q8NGC2 313 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 OR51D1Q8NGF3 324 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 OR52B4Q8NGK2 314 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 OR8J1Q8NGP2 316 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 OR1P1Q8NH06 330 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 LYPD6BQ8NI32 183 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 JOSD2Q8TAC2 188 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 Q8WTZ3 238 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 C7orf33Q8WU49 177 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 MITD1Q8WV92 249 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 SMIM4Q8WVI0 70 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TSEN15Q8WW01 171 aaKnown RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM239Q8WW34 195 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 FAM151AQ8WW52 585 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 RXFP2Q8WXD0 754 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 RGP1Q92546 391 aaPredicted RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 FGF11Q92914 225 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TSLPQ969D9 159 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 LHX4Q969G2 390 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 PSMG2Q969U7 264 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 MCHR2Q969V1 340 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM186Q96B77 213 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 OR2V2Q96R30 315 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 COPS8Q99627 209 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 SULT4A1Q9BR01 284 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF471Q9BX82 626 aaPredicted RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 RAB33BQ9H082 229 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 RBKSQ9H477 322 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM185BQ9H7F4 350 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 METTL7AQ9H8H3 244 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 GPATCH2LQ9NWQ4 482 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 CLN6Q9NWW5 311 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 SLC25A37Q9NYZ2 338 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 MRPL27Q9P0M9 148 aaKnown RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 SLC23A2Q9UGH3 650 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 VAX2Q9UIW0 290 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 IKZF2Q9UKS7 526 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 GSTK1Q9Y2Q3 226 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF337Q9Y3M9 751 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 PCYT1BQ9Y5K3 369 aaPredicted RBP2.24□□□□□ -2.05
LINC01040-201ENST00000425048 SPACA6W5XKT8 324 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 KMT2EQ8IZD2 1858 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 MYO16Q9Y6X6 1858 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 THSD7BQ9C0I4 1608 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 SCN1AP35498 2009 aa2.24□□□□□ -2.05
LINC01040-201ENST00000425048 DOCK6Q96HP0 2047 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms