RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 KIR2DS2P43631 304 aa8.3□□□□□ -1.08
CMSS1-201ENST00000421999 ARL16Q0P5N6 197 aa8.3□□□□□ -1.08
CMSS1-201ENST00000421999 MOGAT2Q3SYC2 334 aa8.3□□□□□ -1.08
CMSS1-201ENST00000421999 SLC51BQ86UW2 128 aa8.3□□□□□ -1.08
CMSS1-201ENST00000421999 FAM216BQ8N7L0 139 aa8.3□□□□□ -1.08
CMSS1-201ENST00000421999 SLC2A9Q9NRM0 540 aa8.3□□□□□ -1.08
CMSS1-201ENST00000421999 PLSCR4Q9NRQ2 329 aa8.3□□□□□ -1.08
CMSS1-201ENST00000421999 CLCF1Q9UBD9 225 aa8.3□□□□□ -1.08
CMSS1-201ENST00000421999 TM4SF5O14894 197 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 COX7A2P2O60397 106 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 RHBDL1O75783 438 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 MUC1P15941 1255 aaPredicted RBP8.29□□□□□ -1.08
CMSS1-201ENST00000421999 THBS3P49746 956 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 OR2B8PP59922 312 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 C1orf100Q5SVJ3 147 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 TMEM182Q6ZP80 229 aaPredicted RBP8.29□□□□□ -1.08
CMSS1-201ENST00000421999 ACOT7LQ6ZUV0 252 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 OR1L1Q8NH94 360 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 FRZBQ92765 325 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 PLEKHA2Q9HB19 425 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 YAE1D1Q9NRH1 226 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 CBLN4Q9NTU7 201 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 PRR13Q9NZ81 148 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 ZNF785A8K8V0 405 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 SCAF4O95104 1147 aaKnown RBP8.29□□□□□ -1.08
CMSS1-201ENST00000421999 SCTP09683 121 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 TAS2R45P59539 299 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 BPIFB3P59826 476 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 PEA15Q15121 130 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 IGSF11Q5DX21 431 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 GLDNQ6ZMI3 551 aaPredicted RBP8.29□□□□□ -1.08
CMSS1-201ENST00000421999 ZNF485Q8NCK3 441 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 SSC4DQ8WTU2 575 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 TMED6Q8WW62 240 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 RBPMSQ93062 196 aaKnown RBP8.29□□□□□ -1.08
CMSS1-201ENST00000421999 LHX4Q969G2 390 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 MRGPRFQ96AM1 343 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 SLC25A38Q96DW6 304 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 NXF2Q9GZY0 626 aaKnown RBP8.29□□□□□ -1.08
CMSS1-201ENST00000421999 C7orf69Q9H7B7 122 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 HIVEP2P31629 2446 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 MED19A0JLT2 244 aaPredicted RBP8.29□□□□□ -1.08
CMSS1-201ENST00000421999 J3QKU1 62 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 ADAP1O75689 374 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 FCGR3AP08637 254 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 PNKDQ8N490 385 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 OR5P3Q8WZ94 311 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 REPIN1Q9BWE0 567 aaKnown RBP8.29□□□□□ -1.08
CMSS1-201ENST00000421999 PPP1R3EQ9H7J1 279 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 HIVEP3Q5T1R4 2406 aa8.29□□□□□ -1.08
CMSS1-201ENST00000421999 MALRD1Q5VYJ5 2156 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 IGHV1-18A0A0C4DH31 117 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 JTBO76095 146 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 TOX4O94842 621 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 METTL15P1P0C7V9 234 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 OR13C7P0DN81 318 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 GGNBP1Q5YKI7 109 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 ABHD12Q8N2K0 398 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 RSRP1Q9BUV0 290 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 C1QTNF5Q9BXJ0 243 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 PITPNC1Q9UKF7 332 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 UBE2L5PA0A1B0GUS4 154 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 H0YL77 283 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 SFT2D2O95562 160 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 HLA-DQB1P01920 261 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 H2AFB1P0C5Y9 115 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 MGST1P10620 155 aaKnown RBP8.28□□□□□ -1.08
CMSS1-201ENST00000421999 FAM122CQ6P4D5 195 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 C1QL2Q7Z5L3 287 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 GCSAMQ8N6F7 178 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 RPS4Y2Q8TD47 263 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 RNF141Q8WVD5 230 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 PARP11Q9NR21 331 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 KCNK7Q9Y2U2 307 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 ANKRD20A5PA0PJZ0 165 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 SOX15O60248 233 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 GNG7O60262 68 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 CTSDP07339 412 aaPredicted RBP8.28□□□□□ -1.08
CMSS1-201ENST00000421999 FAM106CPP0CH98 169 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 PF4V1P10720 104 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 NPBWR1P48145 328 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 IFITM3Q01628 133 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 C4orf17Q53FE4 359 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 NR2C2APQ86WQ0 139 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 GNPNAT1Q96EK6 184 aaPredicted RBP8.28□□□□□ -1.08
CMSS1-201ENST00000421999 Q9N2K0 584 aa8.28□□□□□ -1.08
CMSS1-201ENST00000421999 LOC390937A0A1W2PQ73 354 aa8.27□□□□□ -1.08
CMSS1-201ENST00000421999 MBD3L4A6NDZ8 208 aaPredicted RBP8.27□□□□□ -1.08
CMSS1-201ENST00000421999 MBD3L3A6NE82 208 aaPredicted RBP8.27□□□□□ -1.08
CMSS1-201ENST00000421999 MBD3L5A6NJ08 208 aaPredicted RBP8.27□□□□□ -1.08
CMSS1-201ENST00000421999 SLC25A6P12236 298 aa8.27□□□□□ -1.08
CMSS1-201ENST00000421999 FGF7P21781 194 aa8.27□□□□□ -1.08
CMSS1-201ENST00000421999 NTF4P34130 210 aa8.27□□□□□ -1.08
CMSS1-201ENST00000421999 HIST3H3Q16695 136 aa8.27□□□□□ -1.08
CMSS1-201ENST00000421999 COMMD7Q86VX2 200 aa8.27□□□□□ -1.08
CMSS1-201ENST00000421999 MBD3L2Q8NHZ7 208 aaPredicted RBP8.27□□□□□ -1.08
CMSS1-201ENST00000421999 AQP3Q92482 292 aa8.27□□□□□ -1.08
CMSS1-201ENST00000421999 RHOVQ96L33 236 aa8.27□□□□□ -1.08
CMSS1-201ENST00000421999 C5orf63A6NC05 138 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 CST4P01036 141 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms