RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 XRCC2O43543 280 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 MRPL33O75394 65 aaKnown RBP12.5□□□□□ -0.41
CHRD-204ENST00000420973 CD59P13987 128 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 TLE1Q04724 770 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 ADGRE4PQ86SQ3 457 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 SGPP2Q8IWX5 399 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 PIGCQ92535 297 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 PCGF1Q9BSM1 259 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 RBKSQ9H477 322 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 AK3Q9UIJ7 227 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 E5RGE8 158 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 HLA-HP01893 362 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 CD55P08174 381 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 ZNF32P17041 273 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 TNFSF4P23510 183 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 OR2G3Q8NGZ4 309 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 FAM103A1Q9BTL3 118 aaKnown RBP12.5□□□□□ -0.41
CHRD-204ENST00000420973 SRD5A3Q9H8P0 318 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 PROK2Q9HC23 129 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 ABI3Q9P2A4 366 aa12.5□□□□□ -0.41
CHRD-204ENST00000420973 NUP210LQ5VU65 1888 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 CTXN2P0C2S0 81 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 NBEAP1P0C6P0 100 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 S100GP29377 79 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 ROM1Q03395 351 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 SNAI3Q3KNW1 292 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 TMEM256Q8N2U0 113 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 OR11L1Q8NGX0 322 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 SNIP1Q8TAD8 396 aaKnown RBP12.49□□□□□ -0.41
CHRD-204ENST00000420973 FAM216AQ8WUB2 273 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 ACY3Q96HD9 319 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 ANGPTL4Q9BY76 406 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 GPR35Q9HC97 309 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 GNG13Q9P2W3 67 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 STRAPQ9Y3F4 350 aaKnown RBP12.49□□□□□ -0.41
CHRD-204ENST00000420973 TRBV5-7A0A0A0MS05 114 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 A0A1B0GU03 582 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 A0A1B0GV72 72 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 WDR1O75083 606 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 CTSDP07339 412 aaPredicted RBP12.49□□□□□ -0.41
CHRD-204ENST00000420973 MELTFP08582 738 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 SRP19P09132 144 aaKnown RBP12.49□□□□□ -0.41
CHRD-204ENST00000420973 GLRA1P23415 457 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 IL24Q13007 206 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 PRSS8Q16651 343 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 GJC3Q8NFK1 279 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 LYRM2Q9NU23 88 aaPredicted RBP12.49□□□□□ -0.41
CHRD-204ENST00000420973 AURKAIP1Q9NWT8 199 aaPredicted RBP12.49□□□□□ -0.41
CHRD-204ENST00000420973 CLN8Q9UBY8 286 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 ZNF107Q9UII5 783 aaPredicted RBP12.49□□□□□ -0.41
CHRD-204ENST00000420973 ZFHX4Q86UP3 3567 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 ZNF891A8MT65 544 aaPredicted RBP12.49□□□□□ -0.41
CHRD-204ENST00000420973 NKX2-8O15522 239 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 SOCS1O15524 211 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 FOXG1P55316 489 aaPredicted RBP12.49□□□□□ -0.41
CHRD-204ENST00000420973 CLEC18BQ6UXF7 455 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.49□□□□□ -0.41
CHRD-204ENST00000420973 C20orf144Q9BQM9 153 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 FAM206AQ9NX38 181 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 ZNF586Q9NXT0 402 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 KLK13Q9UKR3 277 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 RFNGQ9Y644 331 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 ABCA4P78363 2273 aa12.49□□□□□ -0.41
CHRD-204ENST00000420973 SLC25A17O43808 307 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 NTF4P34130 210 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 STXBP6Q8NFX7 210 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 HSPB9Q9BQS6 159 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 SCRT1Q9BWW7 348 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 MRPL13Q9BYD1 178 aaKnown RBP12.48□□□□□ -0.41
CHRD-204ENST00000420973 IGHV2-70DA0A0C4DH43 119 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 ZNF735P0CB33 412 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 BMP5P22003 454 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 OMGP23515 440 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 CNN1P51911 297 aaKnown RBP12.48□□□□□ -0.41
CHRD-204ENST00000420973 MTCP1P56278 107 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 TMEM128Q5BJH2 165 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 TUSC5Q8IXB3 177 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 SAXO1Q8IYX7 474 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 BOD1Q96IK1 185 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 TMEM56Q96MV1 263 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 BOKQ9UMX3 212 aaPredicted RBP12.48□□□□□ -0.41
CHRD-204ENST00000420973 TMEM56-RWDD3S4R434 201 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 DMXL2Q8TDJ6 3036 aa12.48□□□□□ -0.41
CHRD-204ENST00000420973 ACP1P24666 158 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 TAS2R31P59538 309 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 ZP4Q12836 540 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 IGFBP7Q16270 282 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 ZNF260Q3ZCT1 412 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 SPATA46Q5T0L3 261 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 C1QL2Q7Z5L3 287 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 SULF2Q8IWU5 870 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 SLC22A24Q8N4F4 322 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 TMEM59Q9BXS4 323 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 LOC102723996A0A087X1L8 192 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 ODAMA1E959 279 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 MEGF11A6BM72 1044 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 H7BYZ3 331 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 IL2RAP01589 272 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 SEC11BP0C7V7 166 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 BLVRBP30043 206 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms