RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 ATXN7O15265 892 aaPredicted RBP6.76□□□□□ -1.33
SIK3-203ENST00000415541 HYPMO75409 117 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 CD55P08174 381 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 S100GP29377 79 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 WDR73Q6P4I2 378 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 Q6ZWC4 215 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 H1FNTQ75WM6 255 aaPredicted RBP6.76□□□□□ -1.33
SIK3-203ENST00000415541 CPT1CQ8TCG5 803 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 PSMF1Q92530 271 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 PARLQ9H300 379 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 NAA60Q9H7X0 242 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 R4GMQ9 66 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 PCNX1Q96RV3 2341 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 COL6A6A6NMZ7 2263 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 ZNF93P35789 620 aaPredicted RBP6.76□□□□□ -1.33
SIK3-203ENST00000415541 RHOGP84095 191 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 FAM78BQ5VT40 261 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 RASL10BQ96S79 203 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 MRPS28Q9Y2Q9 187 aaKnown RBP6.76□□□□□ -1.33
SIK3-203ENST00000415541 NGFRP08138 427 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 ZNF728P0DKX0 622 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 PSG1P11464 419 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 SCGB1A1P11684 91 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 PIGPP57054 158 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 RPL23P62829 140 aaKnown RBP6.76□□□□□ -1.33
SIK3-203ENST00000415541 UNC119Q13432 240 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 GLIPR1L1Q6UWM5 242 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 LIAT1Q6ZQX7 453 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 GPR146Q96CH1 333 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 ZNF703Q9H7S9 590 aaPredicted RBP6.76□□□□□ -1.33
SIK3-203ENST00000415541 PXMP4Q9Y6I8 212 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 REV3LO60673 3130 aa6.76□□□□□ -1.33
SIK3-203ENST00000415541 XIRP2A4UGR9 3374 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 YPEL1O60688 119 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 LILRA1O75019 489 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 NRASP01111 189 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 KRASP01116 189 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 GCH1P30793 250 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 RPL27P61353 136 aaKnown RBP6.75□□□□□ -1.33
SIK3-203ENST00000415541 ZFP36L1Q07352 338 aaKnown RBP6.75□□□□□ -1.33
SIK3-203ENST00000415541 OR2Y1Q8NGV0 311 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 RTN4IP1Q8WWV3 396 aaPredicted RBP6.75□□□□□ -1.33
SIK3-203ENST00000415541 YPEL2Q96QA6 119 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 ZNF665Q9H7R5 613 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 EMC9Q9Y3B6 208 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 TRANK1O15050 2925 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 TMEM250H0YL14 139 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 NPIPB7O75200 414 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 ZNF737O75373 536 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 MT-CO2P00403 227 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 IGHG1P01857 330 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 STAG3L3P0CL85 134 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 TSPOP30536 169 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 COMPP49747 757 aaPredicted RBP6.75□□□□□ -1.33
SIK3-203ENST00000415541 PAX2Q02962 417 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 ROM1Q03395 351 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 RBPJQ06330 500 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 PMCHL1Q16048 86 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 OR4S2Q8NH73 311 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 CT55Q8WUE5 264 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 TMEM186Q96B77 213 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 ATP5SQ99766 215 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 OR10A2Q9H208 303 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 MRPL27Q9P0M9 148 aaKnown RBP6.75□□□□□ -1.33
SIK3-203ENST00000415541 B9D1Q9UPM9 204 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 WIPF3A6NGB9 483 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 TMEM14DPA8MWL7 114 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 ZNF253O75346 499 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 VENTXO95231 258 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 DYNLT3P51808 116 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 ARF1P84077 181 aaKnown RBP6.75□□□□□ -1.33
SIK3-203ENST00000415541 FOXK1P85037 733 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 HIST3H3Q16695 136 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 LRRC10Q5BKY1 277 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 LYZL2Q7Z4W2 148 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 CENPVQ7Z7K6 275 aaPredicted RBP6.75□□□□□ -1.33
SIK3-203ENST00000415541 TMEM252Q8N6L7 170 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 OR51T1Q8NGJ9 327 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 BORCS7Q96B45 105 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 ABHD14BQ96IU4 210 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 ZNF48Q96MX3 618 aaPredicted RBP6.75□□□□□ -1.33
SIK3-203ENST00000415541 AP1S3Q96PC3 154 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 ULBP2Q9BZM5 246 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 SLC39A9Q9NUM3 307 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 PLEK2Q9NYT0 353 aa6.75□□□□□ -1.33
SIK3-203ENST00000415541 BOKQ9UMX3 212 aaPredicted RBP6.75□□□□□ -1.33
SIK3-203ENST00000415541 C9orf172C9J069 976 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 MT-ATP6P00846 226 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 GYPAP02724 150 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 ISG15P05161 165 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 DBHP09172 617 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 AADACP22760 399 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 IL3RAP26951 378 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 RALGAPA1Q6GYQ0 2036 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 ASPHD2Q6ICH7 369 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 SLC23A3Q6PIS1 610 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 LINC00114Q6XXX2 140 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 VASH2Q86V25 355 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 C20orf196Q8IYI0 205 aa6.74□□□□□ -1.33
SIK3-203ENST00000415541 PPP1R14AQ96A00 147 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms