RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 REG1BP48304 166 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 EGR4Q05215 589 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 SNAI3Q3KNW1 292 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 C19orf35Q6ZS72 473 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 ZNF645Q8N7E2 425 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 CALYQ9NYX4 217 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 A0A0G2JMZ2 1700 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 LRRC37A2A6NM11 1700 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 SNCGO76070 127 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 NAAAQ02083 359 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 PSG5Q15238 335 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 CLEC12BQ2HXU8 276 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 CD200R1LQ6Q8B3 271 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 ZNF826PQ6ZT77 177 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 DLL3Q9NYJ7 618 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 PLA2G10O15496 165 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 FOXH1O75593 365 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 TPPP2P59282 170 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 KHDC3LQ587J8 217 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 TRAPPC1Q9Y5R8 145 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 IGHV1-69-2A0A0G2JMI3 117 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 RBFOX3A6NFN3 312 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 SCO1O75880 301 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 ZNF708P17019 499 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 HTR1DP28221 377 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 LINC01590Q5TEZ4 76 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 TPRX1Q8N7U7 411 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 OR4P4Q8NGL7 312 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 ABHD17AQ96GS6 310 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 SCNM1Q9BWG6 230 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 JPT1Q9UK76 154 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 ZNF729A6NN14 1252 aaPredicted RBP14.88□□□□□ -0.03
PHRF1-202ENST00000413872 GALR1P47211 349 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 RPEL1Q2QD12 228 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 A0A1W2PPE3 182 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 RFPL3SP0C7P2 107 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 ADAD2Q8NCV1 583 aaKnown RBP14.88□□□□□ -0.03
PHRF1-202ENST00000413872 ABHD14BQ96IU4 210 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 PPIAL4CA0A0B4J2A2 164 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 PPIAL4GP0DN37 164 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 ZFP36L1Q07352 338 aaKnown RBP14.88□□□□□ -0.03
PHRF1-202ENST00000413872 NAT8Q9UHE5 227 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 NAT8BQ9UHF3 227 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 NAGKQ9UJ70 344 aa14.88□□□□□ -0.03
PHRF1-202ENST00000413872 RPL30P62888 115 aaKnown RBP14.87□□□□□ -0.03
PHRF1-202ENST00000413872 ZNF79Q15937 498 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 PDZD11Q5EBL8 140 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 FADS6Q8N9I5 356 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 SSMEM1Q8WWF3 244 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 PPP1R3EQ9H7J1 279 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 G6PC2Q9NQR9 355 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 PRR13Q9NZ81 148 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 OR2T8A6NH00 312 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 SELENOTP62341 195 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 FAM103A1Q9BTL3 118 aaKnown RBP14.87□□□□□ -0.03
PHRF1-202ENST00000413872 VSIG4Q9Y279 399 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 ZNF273Q14593 569 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 UNQ9370/PRO34162Q6UXP9 181 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 OR9G1Q8NH87 305 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 CLEC5AQ9NY25 188 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 PATJQ8NI35 1801 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 ZFC3H1O60293 1989 aaKnown RBP14.87□□□□□ -0.03
PHRF1-202ENST00000413872 IGSF23A1L1A6 192 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 SMPD2O60906 423 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 ORM1P02763 201 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 MUC1P15941 1255 aaPredicted RBP14.87□□□□□ -0.03
PHRF1-202ENST00000413872 SLC35E3Q7Z769 313 aa14.87□□□□□ -0.03
PHRF1-202ENST00000413872 MPDU1O75352 247 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 CXorf1O96002 111 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 LIPFP07098 398 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 SLC25A53Q5H9E4 307 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 PCSK4Q6UW60 755 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 DPPA3Q6W0C5 159 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 STARD4Q96DR4 205 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 NPVFQ9HCQ7 196 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 RCC2Q9P258 522 aaKnown RBP14.86□□□□□ -0.03
PHRF1-202ENST00000413872 VAX2Q9UIW0 290 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 HILPDAQ9Y5L2 63 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 CTXND1A0A1B0GTU2 59 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 OR2J3O76001 311 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 NAT2P11245 290 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 KLHDC1Q8N7A1 406 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 SCMH1Q96GD3 660 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 C11orf94C9JXX5 98 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 SEC11BP0C7V7 166 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 C4orf17Q53FE4 359 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 RHOVQ96L33 236 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 LOC105371242A0A075B767 164 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 LOC102723971A0A1B0GUV8 181 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 GDF9O60383 454 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 FGF8P55075 233 aaPredicted RBP14.86□□□□□ -0.03
PHRF1-202ENST00000413872 TMEM88Q6PEY1 159 aa14.86□□□□□ -0.03
PHRF1-202ENST00000413872 RPL8P62917 257 aaKnown RBP14.85□□□□□ -0.03
PHRF1-202ENST00000413872 FAM74A3Q4VXF1 159 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 PDE6DO43924 150 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 HLA-DQB1P01920 261 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 ZNF345Q14585 488 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 IGSF11Q5DX21 431 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 NSUN5P2Q63ZY6 315 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 OR4D10Q8NGI6 311 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms