RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 MRPL40Q9NQ50 206 aaKnown RBP3.42□□□□□ -1.86
LSM5-206ENST00000409987 UBQLN4Q9NRR5 601 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 ANAPC11Q9NYG5 84 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 RPS6KB2Q9UBS0 482 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 GLS2Q9UI32 602 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 DKKL1Q9UK85 242 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 ARL5AQ9Y689 179 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 ABCC6O95255 1503 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 AKAP12Q02952 1782 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 NSD3Q9BZ95 1437 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 CASP8AP2Q9UKL3 1982 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 KNDC1Q76NI1 1749 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 PKD1L3Q7Z443 1732 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 QRICH2Q9H0J4 1663 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 IGHV2-26A0A0B4J1V2 119 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 IGHV5-10-1A0A0J9YXX1 117 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 SMIM9A6NGZ8 99 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 OR5K4A6NMS3 321 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 CHST10O43529 356 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 GCM2O75603 506 aaPredicted RBP3.41□□□□□ -1.86
LSM5-206ENST00000409987 IGHV3-11P01762 117 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 SNRPAP09012 282 aaKnown RBP3.41□□□□□ -1.86
LSM5-206ENST00000409987 IGHV1-8P0DP01 117 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 SLC35A2P78381 396 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 SKP2Q13309 424 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 IHHQ14623 411 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 SSX1Q16384 188 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 SNRNP35Q16560 246 aaKnown RBP3.41□□□□□ -1.86
LSM5-206ENST00000409987 LINC00303Q3SY05 128 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 HACD4Q5VWC8 232 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 CLEC20AQ6ZU45 233 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 SLC16A13Q7RTY0 426 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 LINC00596Q86U02 117 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 AKAP14Q86UN6 197 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 TMEM161BQ8NDZ6 487 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 PXT1Q8NFP0 134 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 OR11L1Q8NGX0 322 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 COQ8AQ8NI60 647 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 TWIST2Q8WVJ9 160 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 TMBIM1Q969X1 311 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 ELSPBP1Q96BH3 223 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 BMFQ96LC9 184 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 YPEL4Q96NS1 127 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 OR2A5Q96R48 311 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 NRTNQ99748 197 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 ANAPC13Q9BS18 74 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 FGF23Q9GZV9 251 aaPredicted RBP3.41□□□□□ -1.86
LSM5-206ENST00000409987 DDX19AQ9NUU7 478 aaKnown RBP3.41□□□□□ -1.86
LSM5-206ENST00000409987 ZNF223Q9UK11 482 aaPredicted RBP3.41□□□□□ -1.86
LSM5-206ENST00000409987 FBXO5Q9UKT4 447 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 RAB26Q9ULW5 256 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 SLC22A7Q9Y694 548 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 ZNF780BQ9Y6R6 833 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 KIF13BQ9NQT8 1826 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 PIK3C2GO75747 1445 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 KIAA1551Q9HCM1 1747 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 IFT172Q9UG01 1749 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 SBF1O95248 1867 aa3.41□□□□□ -1.86
LSM5-206ENST00000409987 TMEM72A0PK05 275 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 OR5H1A6NKK0 313 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 EVPLLA8MZ36 301 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 H3BQV1 296 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 M0QYV0 167 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 SOCS1O15524 211 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 TCF21O43680 179 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 COX7A2P2O60397 106 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 LY75O60449 1722 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 EIF1BO60739 113 aaKnown RBP3.4□□□□□ -1.87
LSM5-206ENST00000409987 YIF1AO95070 293 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 UCHL3P15374 230 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 CXCL2P19875 107 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 CXCL3P19876 107 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 EIF1P41567 113 aaKnown RBP3.4□□□□□ -1.87
LSM5-206ENST00000409987 NAA20P61599 178 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 RAP1AP62834 184 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 LTBP1Q14766 1721 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 PTGES3Q15185 160 aaKnown RBP3.4□□□□□ -1.87
LSM5-206ENST00000409987 TAF1AQ15573 450 aaPredicted RBP3.4□□□□□ -1.87
LSM5-206ENST00000409987 MAPK14Q16539 360 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 C2orf83Q53S99 150 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 CENPWQ5EE01 88 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 ZNF684Q5T5D7 378 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 NXNL2Q5VZ03 156 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 SPATA31B1PQ5VZV4 182 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 OR10K2Q6IF99 312 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 SCGB1D4Q6XE38 83 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 SH2D6Q7Z4S9 175 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 S100A7AQ86SG5 101 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 SLC51BQ86UW2 128 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 SLC35G3Q8N808 338 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 LINC01555Q8NAE3 123 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 OR5K1Q8NHB7 308 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 MFSD8Q8NHS3 518 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 TNFAIP8L1Q8WVP5 186 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 ZNF717Q9BY31 904 aaPredicted RBP3.4□□□□□ -1.87
LSM5-206ENST00000409987 GLTPQ9NZD2 209 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 NYAP2Q9P242 653 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 POMPQ9Y244 141 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 CDH23Q9H251 3354 aa3.4□□□□□ -1.87
LSM5-206ENST00000409987 ARFGEF1Q9Y6D6 1849 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms