RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CD80P33681 288 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 MRPL49Q13405 166 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 USF2Q15853 346 aaPredicted RBP12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 Q6ZR03 302 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 STARD4Q96DR4 205 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 AKR1E2Q96JD6 320 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 OR14J1Q9UGF5 321 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 UBE2J1Q9Y385 318 aaPredicted RBP12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 NXPH2O95156 264 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 CEACAM6P40199 344 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 NUTF2P61970 127 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 RHEBQ15382 184 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 OR8G1Q15617 311 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 PRAMEF6Q5VXH4 476 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 ALKBH2Q6NS38 261 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 SELENOHQ8IZQ5 122 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 RAB24Q969Q5 203 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 MSL2Q9HCI7 577 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 OBP2BQ9NPH6 170 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 CHD3Q12873 2000 aaKnown RBP12.82□□□□□ -0.36
SCAMP4-202ENST00000409472 M0R036 132 aa12.82□□□□□ -0.36
SCAMP4-202ENST00000409472 ADAM20O43506 726 aa12.82□□□□□ -0.36
SCAMP4-202ENST00000409472 MBP02144 154 aa12.82□□□□□ -0.36
SCAMP4-202ENST00000409472 NHLH2Q02577 135 aa12.82□□□□□ -0.36
SCAMP4-202ENST00000409472 CA5BP1Q8WTZ4 195 aa12.82□□□□□ -0.36
SCAMP4-202ENST00000409472 MAGT1Q9H0U3 335 aa12.82□□□□□ -0.36
SCAMP4-202ENST00000409472 ERRFI1Q9UJM3 462 aaPredicted RBP12.82□□□□□ -0.36
SCAMP4-202ENST00000409472 TRBV6-6A0A0A6YYG2 114 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 A0A0G2JRQ6 117 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 J3QW42 95 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 PSPNO60542 156 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 CGAP01215 116 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 IGLV2-14P01704 120 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 HOXC12P31275 282 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 MAS1LP35410 378 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 FABP6P51161 128 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 CLINT1Q14677 625 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 MSMPQ1L6U9 139 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 IZUMO4Q1ZYL8 232 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 CDPF1Q6NVV7 123 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 C11orf53Q8IXP5 236 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 H1FOOQ8IZA3 346 aaPredicted RBP12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 OR51H1Q8NH63 302 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 TMEM56Q96MV1 263 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 WASF3Q9UPY6 502 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 TMEM56-RWDD3S4R434 201 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 APC2O95996 2303 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 DIDO1Q9BTC0 2240 aaKnown RBP12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 IGHV1-18A0A0C4DH31 117 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 IFITM10A6NMD0 228 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 FAM157AC9JC47 383 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 E5RGE8 158 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 PROB1E7EW31 1015 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 PGLYRP1O75594 196 aaPredicted RBP12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 RND3P61587 244 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 GAMTQ14353 236 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 CXorf66Q5JRM2 361 aaPredicted RBP12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 ZNF497Q6ZNH5 498 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 OR10D4PQ8NGN7 298 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 OR10J5Q8NHC4 309 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 CABLES2Q9BTV7 478 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 NSG2Q9Y328 171 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 TMED3Q9Y3Q3 217 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 RFNGQ9Y644 331 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 KALRNO60229 2985 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 ADGRG4Q8IZF6 3080 aa12.81□□□□□ -0.36
SCAMP4-202ENST00000409472 MKRN2OSH3BPM6 223 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 DLL1O00548 723 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 ST8SIA3O43173 380 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 MED6O75586 246 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 TESK1Q15569 626 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 ZNF695Q8IW36 515 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 SH3BGRL3Q9H299 93 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 C11orf1Q9H5F2 150 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 ZNF71Q9NQZ8 489 aaPredicted RBP12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 PLSCR4Q9NRQ2 329 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 POLDIP2Q9Y2S7 368 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 OR2W1Q9Y3N9 320 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 PTPRZ1P23471 2315 aaPredicted RBP12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 CDS2O95674 445 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 PAX1P15863 534 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 NDUFA6P56556 154 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 NMSQ5H8A3 153 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 FAM185AQ8N0U4 392 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 ZADH2Q8N4Q0 377 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 FAM215AQ9Y5M1 114 aa12.8□□□□□ -0.36
SCAMP4-202ENST00000409472 ELOA3CA0A087WX78 387 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 IGHV2OR16-5A0A0B4J2B6 119 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 MED19A0JLT2 244 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 TAAR5O14804 337 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 SSSCA1O60232 199 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 TMEM50AO95807 157 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 UCP1P25874 307 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 SULT1A1P50225 295 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 ZNF146Q15072 292 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 RIMS4Q9H426 269 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 METRNQ9UJH8 293 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 TRAPPC2LQ9UL33 140 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 IGSF23A1L1A6 192 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms