RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ANAPC16Q96DE5 110 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 FOXJ2Q9P0K8 574 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 DKK1O94907 266 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 CNN1P51911 297 aaKnown RBP13.18□□□□□ -0.3
LIMS2-205ENST00000409455 RTP5Q14D33 572 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 ZNF295-AS1Q8N0V1 137 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 ZNF525Q8N782 197 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 SPACA9Q96E40 222 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-205ENST00000409455 SLC39A9Q9NUM3 307 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 GOLT1BQ9Y3E0 138 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 TMEM250H0YL14 139 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 RPLP1P05386 114 aaKnown RBP13.17□□□□□ -0.3
LIMS2-205ENST00000409455 SERPINE2P07093 398 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 SCTP09683 121 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 SLC25A6P12236 298 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 PSMB3P49720 205 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 RNPS1Q15287 305 aaKnown RBP13.17□□□□□ -0.3
LIMS2-205ENST00000409455 LRRC75BQ2VPJ9 315 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 OR6C3Q9NZP0 311 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 A0A0G2JRQ6 117 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 OTX2P32243 289 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 SRP14P37108 136 aaKnown RBP13.17□□□□□ -0.3
LIMS2-205ENST00000409455 TRIP6Q15654 476 aaKnown RBP13.17□□□□□ -0.3
LIMS2-205ENST00000409455 HES3Q5TGS1 186 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 FAM27BQ5VT28 67 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 KCNIP4Q6PIL6 250 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 BATF2Q8N1L9 274 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 ZNF611Q8N823 705 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 GPR146Q96CH1 333 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 PARLQ9H300 379 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 NAGKQ9UJ70 344 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 ZNF391Q9UJN7 358 aa13.17□□□□□ -0.3
LIMS2-205ENST00000409455 POLR3KQ9Y2Y1 108 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-205ENST00000409455 IGHV3-15A0A0B4J1V0 119 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 KIR2DS1A0A191URI9 304 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 PRR33A8MZF0 331 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 DLEU1O43261 78 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 SYNGR3O43761 229 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 PGLYRP1O75594 196 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-205ENST00000409455 TYMSP04818 313 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 F2RP25116 425 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 KIR2DS4P43632 304 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 RPL29P47914 159 aaKnown RBP13.16□□□□□ -0.3
LIMS2-205ENST00000409455 KIR2DS1Q14954 304 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 SRSF7Q16629 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
LIMS2-205ENST00000409455 ZNF774Q6NX45 483 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 PPP1R32Q7Z5V6 425 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 OR1F12Q8NHA8 337 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 MRPL30Q8TCC3 161 aaKnown RBP13.16□□□□□ -0.3
LIMS2-205ENST00000409455 TMEM208Q9BTX3 173 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 PSENENQ9NZ42 101 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 SYNGR2O43760 224 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 TUSC2O75896 110 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 IAPPP10997 89 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 OR10J1P30954 320 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 TMEM164Q5U3C3 297 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 PIGCQ92535 297 aa13.16□□□□□ -0.3
LIMS2-205ENST00000409455 VAMP5O95183 116 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 CTXN2P0C2S0 81 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 OR3A1P47881 315 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 MRPL52Q86TS9 123 aaKnown RBP13.15□□□□□ -0.3
LIMS2-205ENST00000409455 TECTBQ96PL2 329 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 WDR61Q9GZS3 305 aaKnown RBP13.15□□□□□ -0.3
LIMS2-205ENST00000409455 IL17BQ9UHF5 180 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 CHCHD2Q9Y6H1 151 aaPredicted RBP13.15□□□□□ -0.3
LIMS2-205ENST00000409455 CRYABP02511 175 aaKnown RBP13.15□□□□□ -0.3
LIMS2-205ENST00000409455 TCF15Q12870 199 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 GAGE1Q13065 139 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 SSPNQ14714 243 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 TESK1Q15569 626 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 PRAMEF20Q5VT98 475 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 CALHM1Q8IU99 346 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 OR51H1Q8NH63 302 aa13.15□□□□□ -0.3
LIMS2-205ENST00000409455 ZNF837Q96EG3 531 aaPredicted RBP13.15□□□□□ -0.3
LIMS2-205ENST00000409455 CHD3Q12873 2000 aaKnown RBP13.15□□□□□ -0.3
LIMS2-205ENST00000409455 FAM90A10PA6NDY2 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A18PA6NE21 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A16PA6NEW6 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A20PA6NIJ5 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A8PA6NJQ4 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A7PA6NKC0 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A22PA8MWA6 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 KIAA1324LA8MWY0 1029 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A12PA8MX19 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A5PA8MXJ8 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A23PA8MXZ1 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 NAPSAO96009 420 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 IGHEP01854 428 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A15PP0C7V4 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A13PP0C7W8 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A14PP0C7W9 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FAM90A24PP0C7X0 464 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 TLE1Q04724 770 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 ARL16Q0P5N6 197 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 DAZAP2Q15038 168 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-205ENST00000409455 ZNF705AQ6ZN79 300 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-205ENST00000409455 RPS19BP1Q86WX3 136 aaKnown RBP13.14□□□□□ -0.31
LIMS2-205ENST00000409455 ZNF573Q86YE8 665 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 WFIKKN1Q96NZ8 548 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 CACNG5Q9UF02 275 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms