RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 KCNE5Q9UJ90 142 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 KLF8O95600 359 aaPredicted RBP5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 NRASP01111 189 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 CXCL2P19875 107 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 GNG4P50150 75 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 RBM39Q14498 530 aaKnown RBP5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 C1QL3Q5VWW1 255 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 DUX4L9Q6RFH8 374 aaPredicted RBP5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 GKN2Q86XP6 184 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 STPG4Q8N801 248 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OR5B3Q8NH48 314 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 RSPRY1Q96DX4 576 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 ANAPC13Q9BS18 74 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 DNAJB12Q9NXW2 375 aaKnown RBP5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 MTFP1Q9UDX5 166 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 BOKQ9UMX3 212 aaPredicted RBP5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 SCN2AQ99250 2005 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OR2M5A3KFT3 312 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OR2W5A6NFC9 320 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 SERINC4A6NH21 518 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 TMEM212A6NML5 194 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 J3QR89 54 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 XRCC3O43542 346 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 GALR3O60755 368 aaPredicted RBP5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 CLDN1O95832 211 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 MT-CO3P00414 261 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 RENP00797 406 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 CRYAAP02489 173 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 MAOAP21397 527 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 PRSS3P35030 304 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 DLX6P56179 175 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 SSBP1Q04837 148 aaKnown RBP5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 RUNX3Q13761 415 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OR10J3Q5JRS4 329 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OR10K2Q6IF99 312 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 ENPP7Q6UWV6 458 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 C12orf54Q6X4T0 127 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OSR2Q8N2R0 312 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OR4N2Q8NGD1 307 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 RBKSQ9H477 322 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 SEC61A2Q9H9S3 476 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 FGF22Q9HCT0 170 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 H0YGG7 62 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 PIN1P1O15428 100 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 ZNF207O43670 478 aaKnown RBP5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 TNFSF13O75888 250 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 MAS1P04201 325 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 SDHBP21912 280 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 DVL1P1P54792 670 aaPredicted RBP5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 ZDHHC11Q9H8X9 412 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 CA10Q9NS85 328 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 THYN1Q9P016 225 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 CKLFQ9UBR5 152 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 USP24Q9UPU5 2620 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 ASXL3Q9C0F0 2248 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 CNOT1A5YKK6 2376 aaKnown RBP5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 A0A087X0K7 114 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 LRP5LA4QPB2 252 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 NPIPB6E9PJ23 425 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 CD14P08571 375 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 CX3CR1P49238 355 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 EMDP50402 254 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 POLR2HP52434 150 aaKnown RBP5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 SLC25A1P53007 311 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 UCP3P55916 312 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 MFAP5Q13361 173 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 VWA2Q5GFL6 755 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 FFAR4Q5NUL3 377 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 SFTPA1Q8IWL2 248 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 ZNF808Q8N4W9 903 aaPredicted RBP5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 RELL2Q8NC24 303 aaPredicted RBP5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 RNF138Q8WVD3 245 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 SPATA25Q9BR10 227 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 RPS10P5Q9NQ39 176 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 LAMP3Q9UQV4 416 aa5.65□□□□□ -1.5
TM9SF4-202ENST00000398022 A0A0G2JLM5 398 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 GAGE12HA6NDE8 117 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 G3V3Q6 166 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 PMS2P2O95744 297 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 OR4A8P0C604 315 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 RPS10P46783 165 aaKnown RBP5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 FAM3BP58499 235 aaPredicted RBP5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 SRPXP78539 464 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 UBE2V2Q15819 145 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM255AQ5JRV8 349 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 APRG1Q8IVJ8 170 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 OR4C16Q8NGL9 310 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF488Q96MN9 340 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 TBX15Q96SF7 602 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 NKX3-1Q99801 234 aaPredicted RBP5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 HSPB9Q9BQS6 159 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 CHD3Q12873 2000 aaKnown RBP5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 SPTBP11277 2137 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 TRAV18A0A075B6X5 111 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 GGT3PA6NGU5 568 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 OTOL1A6NHN0 477 aaPredicted RBP5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 FOXI3A8MTJ6 420 aaPredicted RBP5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 B4DGG1 531 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 M0R2Z0 102 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 DHHO43323 396 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms