RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 BTNL8Q6UX41 500 aa8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 ASCL4Q6XD76 172 aa8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 LEAP2Q969E1 77 aa8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 CLN8Q9UBY8 286 aa8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 NDRG3Q9UGV2 375 aa8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 ZNF318Q5VUA4 2279 aa8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 TRAV17A0A0B4J275 112 aa8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 SYNGR2O43760 224 aa8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 TMEM50AO95807 157 aa8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 FLI1Q01543 452 aaPredicted RBP8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 ZNF718Q3SXZ3 478 aa8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 BIN3Q9NQY0 253 aa8.85□□□□□ -0.99
CPSF1P1-201ENST00000397477 NUDT19A8MXV4 375 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 KLK10O43240 276 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 OR2C1O95371 312 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 NAPSAO96009 420 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 SNCAP37840 140 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 UCP3P55916 312 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 MDS2Q8NDY4 140 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 SLC35B3Q9H1N7 401 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 OR51I2Q9H344 312 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 TMEM30CPA0ZSE6 113 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 PSPNO60542 156 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 PLA2G5P39877 138 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 CTAG1AP78358 180 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 Q6ZRM9 215 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 ZNF709Q8N972 641 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 RNF122Q9H9V4 155 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 RBFOX3A6NFN3 312 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 KIAA1324LA8MWY0 1029 aaPredicted RBP8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 RD3LP0DJH9 198 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 WT1P19544 449 aaPredicted RBP8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 TLE4Q04727 773 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 ZADH2Q8N4Q0 377 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 OR4D5Q8NGN0 318 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 OPA3Q9H6K4 179 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 SLC39A9Q9NUM3 307 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 WASF3Q9UPY6 502 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 PRELID3BQ9Y3B1 194 aa8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 STRAPQ9Y3F4 350 aaKnown RBP8.84□□□□□ -0.99
CPSF1P1-201ENST00000397477 HBZP02008 142 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 OPN1MWP04001 364 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 OPN1MW2P0DN77 364 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 OPN1MW3P0DN78 364 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 COX5BP10606 129 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 NQO2P16083 231 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 RAB13P51153 203 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 COL10A1Q03692 680 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 H2BFWTQ7Z2G1 175 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 WDR86Q86TI4 376 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 NECAP1Q8NC96 275 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 MUCL1Q96DR8 90 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 LYRM2Q9NU23 88 aaPredicted RBP8.83□□□□□ -1
CPSF1P1-201ENST00000397477 LIN7CQ9NUP9 197 aaKnown RBP8.83□□□□□ -1
CPSF1P1-201ENST00000397477 METRNQ9UJH8 293 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 WSB1Q9Y6I7 421 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 ARHGAP21Q5T5U3 1957 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 RAMP3O60896 148 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 IFNA10P01566 189 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 IL24Q13007 206 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 ZNF528Q3MIS6 628 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 ZNF787Q6DD87 383 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 FGFRL1Q8N441 504 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 DRAM1Q8N682 238 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 CYB561D1Q8N8Q1 229 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 SLC25A22Q9H936 323 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 TLN1Q9Y490 2541 aaKnown RBP8.83□□□□□ -1
CPSF1P1-201ENST00000397477 ZGRF1Q86YA3 2104 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 H0Y980 276 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 FCGR3BO75015 233 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 CECR9P0C854 216 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 LYL1P12980 280 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 MDKP21741 143 aaPredicted RBP8.83□□□□□ -1
CPSF1P1-201ENST00000397477 UCP1P25874 307 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 HBG1P69891 147 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 HBG2P69892 147 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 VKORC1L1Q8N0U8 176 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 GTF3AQ92664 365 aaKnown RBP8.83□□□□□ -1
CPSF1P1-201ENST00000397477 RPUSD4Q96CM3 377 aaKnown RBP8.83□□□□□ -1
CPSF1P1-201ENST00000397477 GNPNAT1Q96EK6 184 aaPredicted RBP8.83□□□□□ -1
CPSF1P1-201ENST00000397477 NIPSNAP3BQ9BS92 247 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 SPRY4Q9C004 299 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 ZNF665Q9H7R5 613 aa8.83□□□□□ -1
CPSF1P1-201ENST00000397477 ZNF71Q9NQZ8 489 aaPredicted RBP8.83□□□□□ -1
CPSF1P1-201ENST00000397477 DFFBO76075 338 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 CD55P08174 381 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 DEFA4P12838 97 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 SULT1A1P50225 295 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 CATR1Q13166 79 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 LHX4Q969G2 390 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 SPINT2O43291 252 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 RND3P61587 244 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 PCSK4Q6UW60 755 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 ZNF429Q86V71 674 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 MOGAT3Q86VF5 341 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 ATP5SQ99766 215 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 COL5A1P20908 1838 aaPredicted RBP8.82□□□□□ -1
CPSF1P1-201ENST00000397477 C12orf77C9JDV5 145 aa8.82□□□□□ -1
CPSF1P1-201ENST00000397477 CRYAAP02489 173 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms