RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 DMRT1Q9Y5R6 373 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 TRBV6-7A0A0A0MS04 114 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 A0A1B0GUS0 222 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 ZNF729A6NN14 1252 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-202ENST00000394820 COX6A1P12074 109 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 KITLGP21583 273 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 RBM11P57052 281 aaKnown RBP11.34□□□□□ -0.59
NFKB1-202ENST00000394820 TAS2R30P59541 319 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 DCAF12Q5T6F0 453 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 DNM1P46Q6ZS02 220 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 H2BFWTQ7Z2G1 175 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 LHFPL1Q86WI0 220 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 TUSC5Q8IXB3 177 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 MRPL30Q8TCC3 161 aaKnown RBP11.34□□□□□ -0.59
NFKB1-202ENST00000394820 LOC102724200A0A096LPH7 203 aaPredicted RBP11.33□□□□□ -0.59
NFKB1-202ENST00000394820 TGOLN2O43493 480 aa11.33□□□□□ -0.59
NFKB1-202ENST00000394820 SRSF10O75494 262 aaKnown RBP11.33□□□□□ -0.59
NFKB1-202ENST00000394820 LIFP15018 202 aa11.33□□□□□ -0.59
NFKB1-202ENST00000394820 WNT5AP41221 380 aa11.33□□□□□ -0.59
NFKB1-202ENST00000394820 OR3A1P47881 315 aa11.33□□□□□ -0.59
NFKB1-202ENST00000394820 CYB561P49447 251 aa11.33□□□□□ -0.59
NFKB1-202ENST00000394820 MRPL14Q6P1L8 145 aaKnown RBP11.33□□□□□ -0.59
NFKB1-202ENST00000394820 HEPN1Q6WQI6 88 aa11.33□□□□□ -0.59
NFKB1-202ENST00000394820 C1orf147Q96MC9 270 aaPredicted RBP11.33□□□□□ -0.59
NFKB1-202ENST00000394820 TXN2Q99757 166 aa11.33□□□□□ -0.59
NFKB1-202ENST00000394820 HES7Q9BYE0 225 aa11.33□□□□□ -0.59
NFKB1-202ENST00000394820 TP53TG5Q9Y2B4 290 aa11.33□□□□□ -0.59
NFKB1-202ENST00000394820 LOXL2Q9Y4K0 774 aa11.33□□□□□ -0.59
NFKB1-202ENST00000394820 COL6A6A6NMZ7 2263 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 LRRC3CA6NJW4 275 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 PRB4P10163 310 aaPredicted RBP11.33□□□□□ -0.6
NFKB1-202ENST00000394820 P2RY6Q15077 328 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 EXT1Q16394 746 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 KIAA1644Q3SXP7 199 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 HIKESHIQ53FT3 197 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 SELENOHQ8IZQ5 122 aaKnown RBP11.33□□□□□ -0.6
NFKB1-202ENST00000394820 OR51G1Q8NGK1 321 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 OR2Y1Q8NGV0 311 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 MRGPRDQ8TDS7 321 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 MISP3Q96FF7 219 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 ADAMTS9Q9P2N4 1935 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 CER1O95813 267 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 MBP02144 154 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 HSPB1P04792 205 aaKnown RBP11.33□□□□□ -0.6
NFKB1-202ENST00000394820 BCL2P10415 239 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 FOXG1P55316 489 aaPredicted RBP11.33□□□□□ -0.6
NFKB1-202ENST00000394820 DSCR4P56555 118 aaPredicted RBP11.33□□□□□ -0.6
NFKB1-202ENST00000394820 LINC00205P59089 165 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 LSM6P62312 80 aaKnown RBP11.33□□□□□ -0.6
NFKB1-202ENST00000394820 IL11RAQ14626 422 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 TMEM105Q8N8V8 129 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 MUCL1Q96DR8 90 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 OR2D2Q9H210 308 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 PARD6AQ9NPB6 346 aa11.33□□□□□ -0.6
NFKB1-202ENST00000394820 TRAV38-1A0A0B4J264 116 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 MDH2P40926 338 aaKnown RBP11.32□□□□□ -0.6
NFKB1-202ENST00000394820 DPPA3Q6W0C5 159 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 DBX2Q6ZNG2 339 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 MTCH1Q9NZJ7 389 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 CBR3O75828 277 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 KLF7O75840 302 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-202ENST00000394820 COL10A1Q03692 680 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 ICAM4Q14773 271 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 PRR27Q6MZM9 219 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 OR2T10Q8NGZ9 312 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 VN1R17PQ8TDU5 208 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 MOB3AQ96BX8 217 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 OR2H1Q9GZK4 316 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 ENY2Q9NPA8 101 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 FOXD3Q9UJU5 478 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-202ENST00000394820 SLC22A20A6NK97 555 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 APH1AQ96BI3 265 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 SEMA5BQ9P283 1151 aa11.32□□□□□ -0.6
NFKB1-202ENST00000394820 PKIAP61925 76 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 PRAMEF5Q5TYX0 476 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 PRAMEF6Q5VXH4 476 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 ZNF826PQ6ZT77 177 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 FAM58AQ8N1B3 248 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 MSI2Q96DH6 328 aaKnown RBP11.31□□□□□ -0.6
NFKB1-202ENST00000394820 ABHD14BQ96IU4 210 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 IMMP2LQ96T52 175 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 ZNF552Q9H707 407 aaPredicted RBP11.31□□□□□ -0.6
NFKB1-202ENST00000394820 GATCO43716 136 aaKnown RBP11.31□□□□□ -0.6
NFKB1-202ENST00000394820 TOX4O94842 621 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 CDS2O95674 445 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 DTYMKP23919 212 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 MSMO1Q15800 293 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 Q3ZCU0 254 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 ST6GALNAC3Q8NDV1 305 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 RCC1LQ96I51 464 aaKnown RBP11.31□□□□□ -0.6
NFKB1-202ENST00000394820 PSG11Q9UQ72 335 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 PGLYRP1O75594 196 aaPredicted RBP11.31□□□□□ -0.6
NFKB1-202ENST00000394820 RHBDL1O75783 438 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 NDUFB4O95168 129 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 F2RP25116 425 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 GLIPR1P48060 266 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 ACSM6Q6P461 480 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 ERASQ7Z444 233 aa11.31□□□□□ -0.6
NFKB1-202ENST00000394820 TMEM38BQ9NVV0 291 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms