RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 SVBPQ8N300 66 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 TPRX1Q8N7U7 411 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 ESRP2Q9H6T0 727 aaKnown RBP21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 RNF150Q9ULK6 438 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 RNASEK-C17orf49H0YIS7 233 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 IGHV3-13P01766 116 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 FHITP49789 147 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 SPAG16Q8N0X2 631 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 ZNF645Q8N7E2 425 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 OR5C1Q8NGR4 320 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 CACNG5Q9UF02 275 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 MGAQ8IWI9 3026 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 LAMA5O15230 3695 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 C1QL1O75973 258 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 CAMLGP49069 296 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 DYNLT3P51808 116 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 C3orf36Q3SXR2 165 aa21.45■■□□□ 1.02
SMARCD3-203ENST00000392811 CD5P06127 495 aa21.44■■□□□ 1.02
SMARCD3-203ENST00000392811 PRDX2P32119 198 aa21.44■■□□□ 1.02
SMARCD3-203ENST00000392811 GLRXP35754 106 aa21.44■■□□□ 1.02
SMARCD3-203ENST00000392811 NKX6-1P78426 367 aaPredicted RBP21.44■■□□□ 1.02
SMARCD3-203ENST00000392811 BAXQ07812 192 aa21.44■■□□□ 1.02
SMARCD3-203ENST00000392811 ZNF616Q08AN1 781 aa21.44■■□□□ 1.02
SMARCD3-203ENST00000392811 ZNF295-AS1Q8N0V1 137 aa21.44■■□□□ 1.02
SMARCD3-203ENST00000392811 OR13A1Q8NGR1 328 aa21.44■■□□□ 1.02
SMARCD3-203ENST00000392811 SEC11CQ9BY50 192 aa21.44■■□□□ 1.02
SMARCD3-203ENST00000392811 OR2D2Q9H210 308 aa21.44■■□□□ 1.02
SMARCD3-203ENST00000392811 FAM74A7A6NL05 159 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 RNF212BA8MTL3 300 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 RAB5CP51148 216 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 FAM74A3Q4VXF1 159 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 MIDNQ504T8 468 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 SPRNQ5BIV9 151 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 VHLLQ6RSH7 139 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 TMEM217Q8N7C4 229 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 TOLLIPQ9H0E2 274 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 SRRM5B3KS81 715 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 TSPAN15O95858 294 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 PRH1P02810 166 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 SSTR5P35346 364 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 KLF3P57682 345 aaPredicted RBP21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 TMEM182Q6ZP80 229 aaPredicted RBP21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 ABHD17AQ96GS6 310 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 C5orf30Q96GV9 206 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 C19orf12Q9NSK7 152 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 STRAPQ9Y3F4 350 aaKnown RBP21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 RFNGQ9Y644 331 aa21.43■■□□□ 1.02
SMARCD3-203ENST00000392811 ATP6V0CP27449 155 aa21.42■■□□□ 1.02
SMARCD3-203ENST00000392811 CD80P33681 288 aa21.42■■□□□ 1.02
SMARCD3-203ENST00000392811 PPP1CCP36873 323 aaKnown RBP21.42■■□□□ 1.02
SMARCD3-203ENST00000392811 FAM27E3Q08E93 113 aa21.42■■□□□ 1.02
SMARCD3-203ENST00000392811 ZBTB34Q8NCN2 500 aa21.42■■□□□ 1.02
SMARCD3-203ENST00000392811 OR10Z1Q8NGY1 313 aa21.42■■□□□ 1.02
SMARCD3-203ENST00000392811 NINJ1Q92982 152 aa21.42■■□□□ 1.02
SMARCD3-203ENST00000392811 LURAP1Q96LR2 239 aa21.42■■□□□ 1.02
SMARCD3-203ENST00000392811 OR2V2Q96R30 315 aa21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 RAB40CQ96S21 281 aa21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 IGKV1D-17A0A075B6S4 117 aa21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 MEX3AA1L020 520 aaKnown RBP21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 A8MXE2 369 aa21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 C9JQL5 133 aa21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 ATP6V1G2-DDX39BF2Z307 99 aa21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 H3BP45 60 aa21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 ZNF737O75373 536 aa21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 BMP5P22003 454 aa21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 DVL1P1P54792 670 aaPredicted RBP21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 C22orf34Q6ZV56 151 aa21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 ZNF808Q8N4W9 903 aaPredicted RBP21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 DCTN5Q9BTE1 182 aa21.41■■□□□ 1.02
SMARCD3-203ENST00000392811 F12P00748 615 aaPredicted RBP21.4■■□□□ 1.02
SMARCD3-203ENST00000392811 SFTA3P0C7M3 94 aa21.4■■□□□ 1.02
SMARCD3-203ENST00000392811 RPL23AP62750 156 aaKnown RBP21.4■■□□□ 1.02
SMARCD3-203ENST00000392811 EIF4EBP1Q13541 118 aaPredicted RBP21.4■■□□□ 1.02
SMARCD3-203ENST00000392811 EDDM3AQ14507 147 aa21.4■■□□□ 1.02
SMARCD3-203ENST00000392811 GCSAMQ8N6F7 178 aa21.4■■□□□ 1.02
SMARCD3-203ENST00000392811 MEGF10Q96KG7 1140 aa21.4■■□□□ 1.02
SMARCD3-203ENST00000392811 TP53TG5Q9Y2B4 290 aa21.4■■□□□ 1.02
SMARCD3-203ENST00000392811 K7N7A8 449 aa21.39■■□□□ 1.02
SMARCD3-203ENST00000392811 TXNL1O43396 289 aa21.39■■□□□ 1.02
SMARCD3-203ENST00000392811 CFHR2P36980 270 aa21.39■■□□□ 1.02
SMARCD3-203ENST00000392811 SNCAP37840 140 aa21.39■■□□□ 1.02
SMARCD3-203ENST00000392811 RPL30P62888 115 aaKnown RBP21.39■■□□□ 1.02
SMARCD3-203ENST00000392811 PAX5Q02548 391 aa21.39■■□□□ 1.02
SMARCD3-203ENST00000392811 OR2G3Q8NGZ4 309 aa21.39■■□□□ 1.02
SMARCD3-203ENST00000392811 RFESDQ8TAC1 157 aa21.39■■□□□ 1.02
SMARCD3-203ENST00000392811 IGLV3-9A0A075B6K5 115 aa21.39■■□□□ 1.01
SMARCD3-203ENST00000392811 MED19A0JLT2 244 aaPredicted RBP21.39■■□□□ 1.01
SMARCD3-203ENST00000392811 FAM157AC9JC47 383 aa21.39■■□□□ 1.01
SMARCD3-203ENST00000392811 SPRY3O43610 288 aa21.39■■□□□ 1.01
SMARCD3-203ENST00000392811 SYNGR2O43760 224 aa21.39■■□□□ 1.01
SMARCD3-203ENST00000392811 MOGAT3Q86VF5 341 aa21.39■■□□□ 1.01
SMARCD3-203ENST00000392811 FGFRL1Q8N441 504 aa21.39■■□□□ 1.01
SMARCD3-203ENST00000392811 CADP27708 2225 aa21.39■■□□□ 1.01
SMARCD3-203ENST00000392811 IGHV3OR15-7A0A075B7D8 119 aa21.38■■□□□ 1.01
SMARCD3-203ENST00000392811 IGHV3-43A0A0B4J1X8 118 aa21.38■■□□□ 1.01
SMARCD3-203ENST00000392811 RAMP3O60896 148 aa21.38■■□□□ 1.01
SMARCD3-203ENST00000392811 IGHV3-43DP0DP04 118 aa21.38■■□□□ 1.01
SMARCD3-203ENST00000392811 ATF4P18848 351 aaPredicted RBP21.38■■□□□ 1.01
SMARCD3-203ENST00000392811 STX12Q86Y82 276 aa21.38■■□□□ 1.01
SMARCD3-203ENST00000392811 FAM90A1Q86YD7 464 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms