RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 NPIPB13A6NJU9 1138 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 NPIPB4C9JG80 1138 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 NDUFB7P17568 137 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 SLC35B1P78383 322 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 PLGLAQ15195 96 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 KDF1Q8NAX2 398 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 OR5D13Q8NGL4 314 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 PARLQ9H300 379 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 PHF3Q92576 2039 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 SLC22A20A6NK97 555 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 K7N7A8 449 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 COL10A1Q03692 680 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 MRPL54Q6P161 138 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 LHFPL1Q86WI0 220 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 TUSC5Q8IXB3 177 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 STARD4Q96DR4 205 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 FZR1Q9UM11 496 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 OR5B21A6NL26 309 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 KLRC4-KLRK1H3BQV0 150 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 M0QZK8 103 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 SYNGR1O43759 233 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 ENSAO43768 121 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 GGCTO75223 188 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 ICAM4Q14773 271 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 RNASEKQ6P5S7 137 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 CADM4Q8NFZ8 388 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 SCN5AQ14524 2016 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 IGKV3D-11A0A0A0MRZ8 115 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 GRIFINA4D1Z8 144 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 OR1L6Q8NGR2 347 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 SRD5A3Q9H8P0 318 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 ATP23Q9Y6H3 246 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 RALGAPA1Q6GYQ0 2036 aa11.32□□□□□ -0.6
TRAPPC9-201ENST00000389328 TANC1Q9C0D5 1861 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 VSTM5A8MXK1 200 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 UCP3P55916 312 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 HLA-DRB5Q30154 266 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 ALKBH6Q3KRA9 238 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 TIPARPQ7Z3E1 657 aaKnown RBP11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 CLDND2Q8NHS1 167 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 CORO2AQ92828 525 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 RAB24Q969Q5 203 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 ZNF837Q96EG3 531 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 ACY3Q96HD9 319 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 FGF12P61328 243 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 LBHQ53QV2 105 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 C6orf15Q6UXA7 325 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 Q8IYB0 196 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 SLC35E1Q96K37 410 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 P2RX4Q99571 388 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 CCL4P13236 92 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 CAMPP49913 170 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 SPINK14Q6IE38 97 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 TCTEX1D1Q8N7M0 179 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 PHF7Q9BWX1 381 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 SOD3P08294 240 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 WDR74Q6RFH5 385 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 MRPL13Q9BYD1 178 aaKnown RBP11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 MPC1Q9Y5U8 109 aa11.31□□□□□ -0.6
TRAPPC9-201ENST00000389328 ERVFRD-1P60508 538 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 C3AR1Q16581 482 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 FAM89BQ8N5H3 189 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 ABHD14BQ96IU4 210 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 FOXD3Q9UJU5 478 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 TRPM7Q96QT4 1865 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 A0A087WWC5 75 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 RHOBP62745 196 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 DMWDQ09019 674 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 FGFRL1Q8N441 504 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 OR5A2Q8NGI9 324 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 OR4P4Q8NGL7 312 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 OR4X1Q8NH49 305 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 OR1A1Q9P1Q5 309 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 PDE6DO43924 150 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 CALHM1Q8IU99 346 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 LURAP1LQ8IV03 231 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 RNF122Q9H9V4 155 aa11.3□□□□□ -0.6
TRAPPC9-201ENST00000389328 TRAV38-1A0A0B4J264 116 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 C5orf63A6NC05 138 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 KBTBD11O94819 623 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 TPRX1Q8N7U7 411 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 R3HDM4Q96D70 268 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 LYZL4Q96KX0 146 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 ST8SIA5O15466 376 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 ARL3P36405 182 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 SMIM21Q3B7S5 101 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 RIF1Q5UIP0 2472 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 CHEK1O14757 476 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 SNRPCP09234 159 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 CISD2Q8N5K1 135 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 HSD17B10Q99714 261 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 NCOR1O75376 2440 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 SELEP16581 610 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 QRFPP83859 136 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 HIST3H2BBQ8N257 126 aa11.29□□□□□ -0.6
TRAPPC9-201ENST00000389328 ZNF596Q8TC21 504 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms