RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 FAM3AP98173 230 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 DNAJC3Q13217 504 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 XRCC4Q13426 336 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CEACAM16Q2WEN9 425 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 TMEM31Q5JXX7 168 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 TPRG1LQ5T0D9 272 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 LYZL1Q6UWQ5 148 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 DRAM2Q6UX65 266 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 SCGB1D4Q6XE38 83 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CENPQQ7L2Z9 268 aaPredicted RBP-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 SCD5Q86SK9 330 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CTAGE6Q86UF2 777 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CA13Q8N1Q1 262 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 TRAM1L1Q8N609 369 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 TEX9Q8N6V9 391 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 Q8N814 137 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CNEP1R1Q8N9A8 125 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 INO80EQ8NBZ0 244 aaPredicted RBP-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 OR4C5Q8NGB2 326 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 OR1L8Q8NGR8 309 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CLHC1Q8NHS4 586 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 AQP3Q92482 292 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 SLC7A6Q92536 515 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 ISOC2Q96AB3 205 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 GALMQ96C23 342 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 TSNAXQ99598 290 aaKnown RBP-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 MED18Q9BUE0 208 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CHID1Q9BWS9 393 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 C11orf49Q9H6J7 331 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 ARMC7Q9H6L4 198 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 METTL17Q9H7H0 456 aaPredicted RBP-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 DIABLOQ9NR28 239 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CISHQ9NSE2 258 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 RAB20Q9NX57 234 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 OR5AC2Q9NZP5 309 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 DNAJC27Q9NZQ0 273 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 RHBDD3Q9Y3P4 386 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 EML6Q6ZMW3 1958 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 KIAA1549Q9HCM3 1950 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 SMARCA4P51532 1647 aa-0.35□□□□□ -2.46
SNORD28-201ENST00000384706 REREQ9P2R6 1566 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 IGHV1-18A0A0C4DH31 117 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 A0A0D9SEW6 157 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 MEIS3P1A6NDR6 274 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 CLDN25C9JDP6 229 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 H0Y8G0 127 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 TMEM250H0YL14 139 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 BOLA2-SMG1P6H3BVE0 249 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 M0R1B8 84 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 CPLX1O14810 134 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 UBE2L6O14933 153 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 MPZL2O60487 215 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 PDCD6O75340 191 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 CRYBA1P05813 215 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 TRGC1P0CF51 173 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 LIPCP11150 499 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 DESP17661 470 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 GSTM3P21266 225 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 CRYBB3P26998 211 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 IFNGR2P38484 337 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 CD79BP40259 229 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 SULT1E1P49888 294 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 HNMTP50135 292 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 EMP1P54849 157 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 MP68P56378 58 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 TAS2R30P59541 319 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 RPL31P62899 125 aaKnown RBP-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 RAD51Q06609 339 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 TMEM267Q0VDI3 215 aaPredicted RBP-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 TAL2Q16559 108 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 BEX5Q5H9J7 111 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 C6orf52Q5T4I8 152 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 GDF5OSQ5U4N7 250 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 TMEM220Q6QAJ8 160 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 ZNF705AQ6ZN79 300 aaPredicted RBP-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 SSX9Q7RTT3 188 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 FAM122BQ7Z309 247 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 LUZP2Q86TE4 346 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 ZBTB8OSQ8IWT0 167 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 GAPTQ8N292 157 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 TMEM86AQ8N2M4 240 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 ATPAF2Q8N5M1 289 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 C8orf31Q8N9H6 132 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 C9orf163Q8N9P6 203 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 ACBD4Q8NC06 268 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 OR13C2Q8NGS9 318 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 OR51Q1Q8NH59 317 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 OR51A7Q8NH64 312 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 AKR7LQ8NHP1 331 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 RPS4Y2Q8TD47 263 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 NELFBQ8WX92 580 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 OR8D1Q8WZ84 308 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 BORCS5Q969J3 196 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 TMA16Q96EY4 203 aaKnown RBP-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 OPALINQ96PE5 141 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 PANX1Q96RD7 426 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 VAT1Q99536 393 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 PRRT1Q99946 306 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 EIF5A2Q9GZV4 153 aaKnown RBP-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 NXF2Q9GZY0 626 aaKnown RBP-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms