RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 HNF1AP20823 631 aa10.66□□□□□ -0.7
PRPF40B-202ENST00000380281 RAB7AP51149 207 aa10.66□□□□□ -0.7
PRPF40B-202ENST00000380281 MRPS34P82930 218 aaKnown RBP10.66□□□□□ -0.7
PRPF40B-202ENST00000380281 SLC25A53Q5H9E4 307 aa10.66□□□□□ -0.7
PRPF40B-202ENST00000380281 GPR157Q5UAW9 335 aa10.66□□□□□ -0.7
PRPF40B-202ENST00000380281 TOMM20LQ6UXN7 152 aa10.66□□□□□ -0.7
PRPF40B-202ENST00000380281 C16orf82Q7Z2V1 217 aa10.66□□□□□ -0.7
PRPF40B-202ENST00000380281 TMEM256Q8N2U0 113 aa10.66□□□□□ -0.7
PRPF40B-202ENST00000380281 ZNF665Q9H7R5 613 aa10.66□□□□□ -0.7
PRPF40B-202ENST00000380281 ABCA1O95477 2261 aa10.66□□□□□ -0.7
PRPF40B-202ENST00000380281 B4DEV8 164 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 LINC00696Q6ZRV3 163 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 RHBDD1Q8TEB9 315 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 KCNS2Q9ULS6 477 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 NBASA2RRP1 2371 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 IGHV1-45A0A0A0MS14 117 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 ZNF732B4DXR9 585 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 LAMA5O15230 3695 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 NUPR1O60356 82 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 LILRA1O75019 489 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 COX6A1P12074 109 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 TMEM252Q8N6L7 170 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 ADPRHL1Q8NDY3 354 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 OR1L6Q8NGR2 347 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 NUDT16L1Q9BRJ7 211 aaKnown RBP10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 OR2H1Q9GZK4 316 aa10.65□□□□□ -0.7
PRPF40B-202ENST00000380281 PINLYPA6NC86 204 aa10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 GALR2O43603 387 aaPredicted RBP10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 KLF7O75840 302 aaPredicted RBP10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 CHRNB4P30926 498 aa10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 RAC1P63000 192 aa10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 ARF1P84077 181 aaKnown RBP10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 ARL6IP1Q15041 203 aa10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 KCNMB1Q16558 191 aa10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 TMEM54Q969K7 222 aa10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 SPSB1Q96BD6 273 aa10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 MS4A10Q96PG2 267 aa10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 DEPPQ9NTK1 212 aa10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 RNF150Q9ULK6 438 aa10.65□□□□□ -0.71
PRPF40B-202ENST00000380281 LY6G6EA0A0G2JKS1 128 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 B4E171 279 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 PROB1E7EW31 1015 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 CCL25O15444 150 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 MRPL33O75394 65 aaKnown RBP10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 PTTG1IPP53801 180 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 FAM53AQ6NSI3 398 aaPredicted RBP10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 MRPL14Q6P1L8 145 aaKnown RBP10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 MRPL21Q7Z2W9 205 aaKnown RBP10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 SPEM1Q8N4L4 309 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 GBGT1Q8N5D6 347 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 HLA-CQ95604 372 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 BOD1Q96IK1 185 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 SDF2L1Q9HCN8 221 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 ERRFI1Q9UJM3 462 aaPredicted RBP10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 U3KQA8 63 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 A0A0G2JRQ6 117 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 C20orf202A1L168 122 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 WDR1O75083 606 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 CBR3O75828 277 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 VAMP5O95183 116 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 TFF1P04155 84 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 DEFA4P12838 97 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 RBM11P57052 281 aaKnown RBP10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 MAJINQ3KP22 176 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 SPINK9Q5DT21 86 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 C10orf128Q5T292 105 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 VHLLQ6RSH7 139 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 CCDC71LQ8N9Z2 235 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 RBMXL1Q96E39 390 aaKnown RBP10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 SIT1Q9Y3P8 196 aa10.64□□□□□ -0.71
PRPF40B-202ENST00000380281 ETV2O00321 342 aaPredicted RBP10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 CRYGSP22914 178 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 COA6Q5JTJ3 125 aaKnown RBP10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 OR8G2PQ6IF36 304 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 C20orf204Q6ZNR8 217 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 LHFPL2Q6ZUX7 228 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 TUSC5Q8IXB3 177 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 SNIP1Q8TAD8 396 aaKnown RBP10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 ZNF552Q9H707 407 aaPredicted RBP10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 VSIRQ9H7M9 311 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 LOC102723971A0A1B0GUV8 181 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 CBY3A6NI87 242 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 OR10J1P30954 320 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 FOLR3P41439 243 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 MLF1P58340 268 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 PRDX4Q13162 271 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 ZNF266Q14584 549 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 SAP25Q8TEE9 199 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 ZFP30Q9Y2G7 519 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 PKDREJQ9NTG1 2253 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 CEP192Q8TEP8 1941 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 SERPINE2P07093 398 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 PFN1P07737 140 aaKnown RBP10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 OTX1P32242 354 aaPredicted RBP10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 GALR1P47211 349 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 FUT6P51993 359 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 RAC3P60763 192 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 MMDQ15546 238 aa10.63□□□□□ -0.71
PRPF40B-202ENST00000380281 TESK1Q15569 626 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms