RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 C3orf56Q8N813 242 aa16.44■□□□□ 0.22
TRIM13-203ENST00000378183 OR56B4Q8NH76 319 aa16.44■□□□□ 0.22
TRIM13-203ENST00000378183 PARP12Q9H0J9 701 aaKnown RBP16.44■□□□□ 0.22
TRIM13-203ENST00000378183 OR1A1Q9P1Q5 309 aa16.44■□□□□ 0.22
TRIM13-203ENST00000378183 ZNF230Q9UIE0 474 aaPredicted RBP16.44■□□□□ 0.22
TRIM13-203ENST00000378183 IGHV1-3A0A0C4DH29 117 aa16.43■□□□□ 0.22
TRIM13-203ENST00000378183 A0A1B0GUS0 222 aa16.43■□□□□ 0.22
TRIM13-203ENST00000378183 GAPDHP04406 335 aaKnown RBP16.43■□□□□ 0.22
TRIM13-203ENST00000378183 MRPS15P82914 257 aaKnown RBP16.43■□□□□ 0.22
TRIM13-203ENST00000378183 HERPUD1Q15011 391 aa16.43■□□□□ 0.22
TRIM13-203ENST00000378183 HACD4Q5VWC8 232 aa16.43■□□□□ 0.22
TRIM13-203ENST00000378183 GPR141Q7Z602 305 aa16.43■□□□□ 0.22
TRIM13-203ENST00000378183 RTN4IP1Q8WWV3 396 aaPredicted RBP16.43■□□□□ 0.22
TRIM13-203ENST00000378183 MAFIPQ8WZ33 124 aa16.43■□□□□ 0.22
TRIM13-203ENST00000378183 ABHD14AQ9BUJ0 271 aa16.43■□□□□ 0.22
TRIM13-203ENST00000378183 ZNF747Q9BV97 191 aa16.43■□□□□ 0.22
TRIM13-203ENST00000378183 TMEM235A6NFC5 223 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 SCGNO76038 276 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 RGS11O94810 467 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 SNRNP70P08621 437 aaKnown RBP16.42■□□□□ 0.22
TRIM13-203ENST00000378183 IL3RAP26951 378 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 KIR2DS4P43632 304 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 ARFRP1Q13795 201 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 HABP2Q14520 560 aaPredicted RBP16.42■□□□□ 0.22
TRIM13-203ENST00000378183 ARL6IP1Q15041 203 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 THNSL2Q86YJ6 484 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 LYG1Q8N1E2 194 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 CAPSLQ8WWF8 208 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 SLC23A1Q9UHI7 598 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 SIGLEC9Q9Y336 463 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 RNF114Q9Y508 228 aa16.42■□□□□ 0.22
TRIM13-203ENST00000378183 IGKV1D-8A0A087WSZ0 117 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 GSTP1P09211 210 aaKnown RBP16.41■□□□□ 0.22
TRIM13-203ENST00000378183 GSTT2P0CG29 244 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 GSTT2BP0CG30 244 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 CEACAM6P40199 344 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 PROK1P58294 105 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 KRTAP10-3P60369 221 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 Q6ZS46 218 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 MOB3BQ86TA1 216 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 IZUMO1Q8IYV9 350 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 RBM14Q96PK6 669 aaKnown RBP16.41■□□□□ 0.22
TRIM13-203ENST00000378183 NPFFR1Q9GZQ6 430 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 ABCG5Q9H222 651 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 IFI27L2Q9H2X8 130 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 RANBP3Q9H6Z4 567 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-203ENST00000378183 ZNF702PQ9H963 129 aa16.41■□□□□ 0.22
TRIM13-203ENST00000378183 TRAV18A0A075B6X5 111 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 IGHV3-72A0A0B4J1Y9 119 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 ST8SIA5O15466 376 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 FABP7O15540 132 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 SSX5O60225 188 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 FAM106CPP0CH98 169 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 ZBTB25P24278 435 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 TALDO1P37837 337 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 BLCAPP62952 87 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 SRSF7Q16629 238 aaKnown RBP eCLIP16.4■□□□□ 0.22
TRIM13-203ENST00000378183 IGSF11Q5DX21 431 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 Q6ZS49 121 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 OR2AK2Q8NG84 335 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 OR4A4PQ8NGN8 299 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 OR4C13Q8NGP0 309 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 NUDCD2Q8WVJ2 157 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 WFDC12Q8WWY7 111 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 RBMXL1Q96E39 390 aaKnown RBP16.4■□□□□ 0.22
TRIM13-203ENST00000378183 SLC25A33Q9BSK2 321 aa16.4■□□□□ 0.22
TRIM13-203ENST00000378183 A0A0A6YYH2 397 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 A6NJ64 397 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 LANCL1O43813 399 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 OR2F2O95006 317 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 AMY1AP04745 511 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 AMY2AP04746 511 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 DTYMKP23919 212 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 OR3A3P47888 321 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 SRSF4Q08170 494 aaKnown RBP16.39■□□□□ 0.21
TRIM13-203ENST00000378183 EBI3Q14213 229 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 PNLIPRP3Q17RR3 467 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 C16orf82Q7Z2V1 217 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 TGIF2LXQ8IUE1 241 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 Q8N2B8 174 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 KCTD12Q96CX2 325 aaKnown RBP16.39■□□□□ 0.21
TRIM13-203ENST00000378183 AGMATQ9BSE5 352 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 CABLES2Q9BTV7 478 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 C11orf54Q9H0W9 315 aaPredicted RBP16.39■□□□□ 0.21
TRIM13-203ENST00000378183 DCSTAMPQ9H295 470 aa16.39■□□□□ 0.21
TRIM13-203ENST00000378183 SAA2-SAA4A0A096LPE2 208 aa16.38■□□□□ 0.21
TRIM13-203ENST00000378183 ZNF736B4DX44 427 aaPredicted RBP16.38■□□□□ 0.21
TRIM13-203ENST00000378183 ITGB1BP1O14713 200 aa16.38■□□□□ 0.21
TRIM13-203ENST00000378183 HSPA12AO43301 675 aa16.38■□□□□ 0.21
TRIM13-203ENST00000378183 IGKV1D-33P01593 117 aa16.38■□□□□ 0.21
TRIM13-203ENST00000378183 IGKV1-33P01594 117 aa16.38■□□□□ 0.21
TRIM13-203ENST00000378183 SAA2P0DJI9 122 aaPredicted RBP16.38■□□□□ 0.21
TRIM13-203ENST00000378183 RPL5P46777 297 aaKnown RBP16.38■□□□□ 0.21
TRIM13-203ENST00000378183 KIR2DS1Q14954 304 aa16.38■□□□□ 0.21
TRIM13-203ENST00000378183 UBE2NLQ5JXB2 153 aa16.38■□□□□ 0.21
TRIM13-203ENST00000378183 ZNF833PQ6ZTB9 187 aa16.38■□□□□ 0.21
TRIM13-203ENST00000378183 SAMD12Q8N8I0 201 aa16.38■□□□□ 0.21
TRIM13-203ENST00000378183 DTX3Q8N9I9 347 aa16.38■□□□□ 0.21
TRIM13-203ENST00000378183 PHF21AQ96BD5 680 aa16.38■□□□□ 0.21
TRIM13-203ENST00000378183 ZNF251Q9BRH9 671 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms