RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 NGBQ9NPG2 151 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 TMEM56-RWDD3S4R434 201 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 DIRC3C9JPN6 131 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 APCSP02743 223 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 COX5BP10606 129 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 MPLP40238 635 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 FABP6P51161 128 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 HLA-BQ31612 363 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 ZNF343Q6P1L6 599 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 BTNL3Q6UXE8 466 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 OR1K1Q8NGR3 316 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 OR10X1Q8NGY0 326 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 SGMS2Q8NHU3 365 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 MRGPRDQ8TDS7 321 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 IER2Q9BTL4 223 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 EGLN1Q9GZT9 426 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 K7N7A8 449 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 CD99P14209 185 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 CD1BP29016 333 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 SPINK9Q5DT21 86 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 PRR27Q6MZM9 219 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 LHFPL1Q86WI0 220 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 SARAFQ96BY9 339 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 TIMP4Q99727 224 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 TMEM191AQ9H0A3 160 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 ZNF552Q9H707 407 aaPredicted RBP7.57□□□□□ -1.2
PCDH9-202ENST00000377865 CRYAAP02489 173 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 CCL2P13500 99 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 NDUFB7P17568 137 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 IER3P46695 156 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 ICAM4Q14773 271 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 VN1R17PQ8TDU5 208 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 ESRP2Q9H6T0 727 aaKnown RBP7.56□□□□□ -1.2
PCDH9-202ENST00000377865 OR6C3Q9NZP0 311 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 ZDHHC8Q9ULC8 765 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 HELTA6NFD8 242 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 CBY3A6NI87 242 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 HIST1H1BP16401 226 aaKnown RBP7.56□□□□□ -1.2
PCDH9-202ENST00000377865 PRSS12P56730 875 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 C10orf91Q5T1B1 145 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 CYP2G1PQ6ZSU1 146 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 FA2HQ7L5A8 372 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 UBALD1Q8TB05 177 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 H1FXQ92522 213 aaKnown RBP7.56□□□□□ -1.2
PCDH9-202ENST00000377865 SDF2L1Q9HCN8 221 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 TMEM242Q9NWH2 141 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 DOCK3Q8IZD9 2030 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 MDKP21741 143 aaPredicted RBP7.56□□□□□ -1.2
PCDH9-202ENST00000377865 CASP6P55212 293 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 TEPPQ6URK8 271 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 DNM1P46Q6ZS02 220 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 CLN8Q9UBY8 286 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 RNF24Q9Y225 148 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 TRAV9-1A0A075B6T8 112 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 IGKV1D-43A0A0B4J1Z2 117 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 A0A0J9YW62 118 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 FAM157CP0CG43 387 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 UCP1P25874 307 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 LRRC75BQ2VPJ9 315 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 RIPPLY2Q5TAB7 128 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 NHLRC2Q8NBF2 726 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 OR4C12Q96R67 309 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 PARLQ9H300 379 aa7.56□□□□□ -1.2
PCDH9-202ENST00000377865 BARX1Q9HBU1 254 aaPredicted RBP7.56□□□□□ -1.2
PCDH9-202ENST00000377865 A0A0A6YYD4 124 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 IGHV5-10-1A0A0J9YXX1 117 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 HPRT1P00492 218 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 VMA21Q3ZAQ7 101 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.55□□□□□ -1.2
PCDH9-202ENST00000377865 WDFY1Q8IWB7 410 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 OR4P4Q8NGL7 312 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 TPPP3Q9BW30 176 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 PRNDQ9UKY0 176 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 PAM16Q9Y3D7 125 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 IGHV1-45A0A0A0MS14 117 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 TRGV5A0A0B4J1U4 118 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 MEOX1P50221 254 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 LRRC3CA6NJW4 275 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 DEFB108AA8MXU0 73 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 NPIPB7O75200 414 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 SLC25A5P05141 298 aaKnown RBP7.55□□□□□ -1.2
PCDH9-202ENST00000377865 ADCYAP1P18509 176 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 TNFRSF9Q07011 255 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 PSG5Q15238 335 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 PMCHL1Q16048 86 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 C1QL2Q7Z5L3 287 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 SCCPDHQ8NBX0 429 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 UQCR10Q9UDW1 63 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 IGHV3-64DA0A0J9YX35 117 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 TEX50A0A1B0GTY4 177 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 ZNF891A8MT65 544 aaPredicted RBP7.55□□□□□ -1.2
PCDH9-202ENST00000377865 GZMHP20718 246 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 BMP5P22003 454 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 LRRC29Q8WV35 223 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 HSPB9Q9BQS6 159 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 IL19Q9UHD0 177 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 RAMP1O60894 148 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 CLDN14O95500 239 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 DEFA4P12838 97 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 FHL1Q13642 323 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms