RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 RDH5Q92781 318 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 IL22RA2Q969J5 263 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 OR5B12Q96R08 314 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 PROK2Q9HC23 129 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 NAT8Q9UHE5 227 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 PRSS50Q9UI38 385 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 ATP23Q9Y6H3 246 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 A0A1W2PPQ1 181 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 H7BYZ3 331 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 HS3ST1O14792 307 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 CCL2P13500 99 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 OTX2P32243 289 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 RAC3P60763 192 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 FGF12P61328 243 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 PRDX4Q13162 271 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 TECTBQ96PL2 329 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 P2RX4Q99571 388 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 SLC39A9Q9NUM3 307 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 RNF150Q9ULK6 438 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 UBE2L5PA0A1B0GUS4 154 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 A8MWP6 167 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 C3orf80F5H4A9 247 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 TRAPPC2LH3BP13 241 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 CTXN2P0C2S0 81 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 SSR4P51571 173 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 PCBD1P61457 104 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 NHLH1Q02575 133 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 RTP5Q14D33 572 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 TMEM241Q24JQ0 296 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 Q6ZS49 121 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 PRR18Q8N4B5 295 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 OR10J5Q8NHC4 309 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 TMEM37Q8WXS4 190 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 SF3B5Q9BWJ5 86 aaKnown RBP9.43□□□□□ -0.9
CCDC40-203ENST00000374877 CRIM1Q9NZV1 1036 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 RBM7Q9Y580 266 aaKnown RBP9.43□□□□□ -0.9
CCDC40-203ENST00000374877 ARHGAP21Q5T5U3 1957 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 GJE1A6NN92 205 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 MKRN2OSH3BPM6 223 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 SERPINA7P05543 415 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 GALR1P47211 349 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 HBG1P69891 147 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 HBG2P69892 147 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 BSXQ3C1V8 233 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 C20orf204Q6ZNR8 217 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 C2orf88Q9BSF0 95 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 ELOVL1Q9BW60 279 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 ASCL3Q9NQ33 180 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 MTCH1Q9NZJ7 389 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 MLF1P58340 268 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 TMEM41BQ5BJD5 291 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 OR8G2PQ6IF36 304 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 MYPOPQ86VE0 399 aaPredicted RBP9.43□□□□□ -0.9
CCDC40-203ENST00000374877 CPEB3Q8NE35 698 aaKnown RBP9.43□□□□□ -0.9
CCDC40-203ENST00000374877 ZNF488Q96MN9 340 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 PCGF1Q9BSM1 259 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 WASF3Q9UPY6 502 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 PPP1R3CQ9UQK1 317 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 OR2W1Q9Y3N9 320 aa9.43□□□□□ -0.9
CCDC40-203ENST00000374877 A0A1W2PR80 420 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A10PA6NDY2 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A18PA6NE21 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A16PA6NEW6 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A20PA6NIJ5 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A8PA6NJQ4 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A7PA6NKC0 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A22PA8MWA6 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 KIAA1324LA8MWY0 1029 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A12PA8MX19 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A5PA8MXJ8 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A23PA8MXZ1 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 PFN1P07737 140 aaKnown RBP9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A15PP0C7V4 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A13PP0C7W8 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A14PP0C7W9 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FAM90A24PP0C7X0 464 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 GZMHP20718 246 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 PCSK4Q6UW60 755 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 HAPLN4Q86UW8 402 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 MKXQ8IYA7 352 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 OR5T1Q8NG75 326 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 UBALD1Q8TB05 177 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 PSMF1Q92530 271 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 OR4C12Q96R67 309 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 PSMG3Q9BT73 122 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FGF23Q9GZV9 251 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-203ENST00000374877 TRAV39A0A0B4J263 110 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 LRRC3CA6NJW4 275 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 PCNX2A6NKB5 2137 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 ZNF716A6NP11 495 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 TCAPO15273 167 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 SYNGR1O43759 233 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 CBR3O75828 277 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 TRAPPC6AO75865 159 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 SERF2P84101 59 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 MEF2BQ02080 365 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-203ENST00000374877 LRRC75BQ2VPJ9 315 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 KRTAP27-1Q3LI81 207 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 CYP2G1PQ6ZSU1 146 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 RPS19BP1Q86WX3 136 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms