RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 SLC35B1P78383 322 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 B4E171 279 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 OR2H2O95918 312 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 SCTP09683 121 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 TSPAN7P41732 249 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 ZNF826PQ6ZT77 177 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 IL36RNQ9UBH0 155 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 PXMP4Q9Y6I8 212 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 CEACAM18A8MTB9 384 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 VSIG10L2P0DP72 767 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 MRPS18AQ9NVS2 196 aaKnown RBP19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 TBX15Q96SF7 602 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 PAM16Q9Y3D7 125 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 ADAMTSL1Q8N6G6 1762 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 FAM214BQ7L5A3 538 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 OR5AC2Q9NZP5 309 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 ATG2BQ96BY7 2078 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 A0A0U1RQV5 110 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 ZNF735P0CB33 412 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 ITLN1Q8WWA0 313 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 C9orf172C9J069 976 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 M0R3E3 92 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 ACAA1P09110 424 aaPredicted RBP19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 LRRC75BQ2VPJ9 315 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 STPG1Q5TH74 334 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 HCP5Q6MZN7 132 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 CGB1A6NKQ9 187 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 FGF12P61328 243 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 DCAF12L2Q5VW00 463 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 METTL1Q9UBP6 276 aaKnown RBP19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 OR10J1P30954 320 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 WDFY1Q8IWB7 410 aa19.18■□□□□ 0.66
TM9SF3-201ENST00000371142 TSPAN2O60636 221 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 LMX1BO60663 402 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 OVCH2Q7RTZ1 564 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 RSG1Q9BU20 258 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 PLAUP00749 431 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 HOXA6P31267 233 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 RPL27AP46776 148 aaKnown RBP19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 NPVFQ9HCQ7 196 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 MGST3O14880 152 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 KIR2DL2P43627 348 aaPredicted RBP19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 SLC25A33Q9BSK2 321 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 IL19Q9UHD0 177 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 FAM74A7A6NL05 159 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 ATXN7O15265 892 aaPredicted RBP19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 AMELYQ99218 206 aa19.17■□□□□ 0.66
TM9SF3-201ENST00000371142 IFITM10A6NMD0 228 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 SSX8Q7RTT4 187 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 BPIFA4PQ86YQ2 179 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 PTX4Q96A99 478 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 PCM1Q15154 2024 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 KLF7O75840 302 aaPredicted RBP19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 FTH1P19P0C7X4 201 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 NUDT16L1Q9BRJ7 211 aaKnown RBP19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 GAPDHP04406 335 aaKnown RBP19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 IZUMO4Q1ZYL8 232 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 OR4C12Q96R67 309 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 MCM3APO60318 1980 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 ZNF345Q14585 488 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 NUP214P35658 2090 aaPredicted RBP19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 CLEC2AQ6UVW9 174 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 ZNF645Q8N7E2 425 aa19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 SF3B6Q9Y3B4 125 aaKnown RBP19.16■□□□□ 0.66
TM9SF3-201ENST00000371142 CYB561D1Q8N8Q1 229 aa19.15■□□□□ 0.66
TM9SF3-201ENST00000371142 C16orf92Q96LL3 132 aa19.15■□□□□ 0.66
TM9SF3-201ENST00000371142 GUCD1Q96NT3 240 aa19.15■□□□□ 0.66
TM9SF3-201ENST00000371142 GCSHP23434 173 aa19.15■□□□□ 0.66
TM9SF3-201ENST00000371142 OR1N2Q8NGR9 330 aa19.15■□□□□ 0.66
TM9SF3-201ENST00000371142 SP7Q8TDD2 431 aaPredicted RBP19.15■□□□□ 0.66
TM9SF3-201ENST00000371142 TMEM189A5PLL7 270 aa19.15■□□□□ 0.66
TM9SF3-201ENST00000371142 PILRAQ9UKJ1 303 aa19.15■□□□□ 0.66
TM9SF3-201ENST00000371142 WISP3O95389 354 aaPredicted RBP19.15■□□□□ 0.66
TM9SF3-201ENST00000371142 NMUP48645 174 aa19.15■□□□□ 0.66
TM9SF3-201ENST00000371142 OR4A5Q8NH83 315 aa19.14■□□□□ 0.66
TM9SF3-201ENST00000371142 RBKSQ9H477 322 aa19.14■□□□□ 0.66
TM9SF3-201ENST00000371142 PF4V1P10720 104 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 PRSS53Q2L4Q9 553 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 FGF11Q92914 225 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 IGKV3D-15A0A087WSY6 115 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 IGKV3-15P01624 115 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 NAT2P11245 290 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 GUCA2BQ16661 112 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 BCL2P10415 239 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 CXCL2P19875 107 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 LIMS1P48059 325 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 MFAP2P55001 183 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 RAB24Q969Q5 203 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 ELOVL1Q9BW60 279 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 A6NDN8 102 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 H0Y980 276 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 NGFRP08138 427 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 SLC25A53Q5H9E4 307 aa19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 COLQQ9Y215 455 aaPredicted RBP19.14■□□□□ 0.65
TM9SF3-201ENST00000371142 SNAI3Q3KNW1 292 aa19.13■□□□□ 0.65
TM9SF3-201ENST00000371142 H1FOOQ8IZA3 346 aaPredicted RBP19.13■□□□□ 0.65
TM9SF3-201ENST00000371142 SGMS2Q8NHU3 365 aa19.13■□□□□ 0.65
TM9SF3-201ENST00000371142 MARS2Q96GW9 593 aaKnown RBP19.13■□□□□ 0.65
TM9SF3-201ENST00000371142 DIRC2Q96SL1 478 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms