RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 ID4P47928 161 aa6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 TMPRSS3P57727 454 aa6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 HIST1H3AP68431 136 aa6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 EWSR1Q01844 656 aaKnown RBP eCLIP6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 TCF15Q12870 199 aa6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 HIST2H3PS2Q5TEC6 136 aa6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 STUMQ69YW2 141 aa6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 HIST2H3AQ71DI3 136 aa6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 SNRNP40Q96DI7 357 aaKnown RBP6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 STARD4Q96DR4 205 aa6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 GNPNAT1Q96EK6 184 aaPredicted RBP6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 CRIM1Q9NZV1 1036 aa6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 CEP192Q8TEP8 1941 aa6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 ZFYVE26Q68DK2 2539 aa6.05□□□□□ -1.44
TGFBR3-202ENST00000370399 TRAV38-1A0A0B4J264 116 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 hADV38S2A0JD32 116 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 HOXB1P14653 301 aaPredicted RBP6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 TUSC1Q2TAM9 212 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM122CQ6P4D5 195 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 TMEM65Q6PI78 240 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 OR5D13Q8NGL4 314 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 PLPPR1Q8TBJ4 325 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 RNF138Q8WVD3 245 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 TRAV14DV4A0A0A6YYC5 116 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 ODAMA1E959 279 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 PRSS44E7EML9 344 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 K7EM74 188 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 ATXN7O15265 892 aaPredicted RBP6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 CDS2O95674 445 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 F12P00748 615 aaPredicted RBP6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 SLC25A4P12235 298 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 GLRXP35754 106 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 RPL35P42766 123 aaKnown RBP6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FGF8P55075 233 aaPredicted RBP6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 RTL8BQ17RB0 113 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 CLEC12BQ2HXU8 276 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 PIP4P1Q86T03 277 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 MOB3BQ86TA1 216 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 C1orf147Q96MC9 270 aaPredicted RBP6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 SFXN3Q9BWM7 321 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 OR51I2Q9H344 312 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 CISD1Q9NZ45 108 aaKnown RBP6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 CLN8Q9UBY8 286 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 TRAV24A0A0B4J272 114 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 hCG_1809904A0A1W2PP81 198 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 A0A1W2PPE2 198 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 A0A1W2PR64 198 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 A0A1W2PRV1 198 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 UMAD1C9J7I0 102 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 B3GALNT1O75752 331 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 CD40P25942 277 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 ARSJQ5FYB0 599 aaPredicted RBP6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 SAXO1Q8IYX7 474 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM57AQ8TBR7 257 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 R3HDM4Q96D70 268 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 RAB40CQ96S21 281 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 NKX6-2Q9C056 277 aaPredicted RBP6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 MS4A5Q9H3V2 200 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 MYOZ1Q9NP98 299 aaPredicted RBP6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 CCDC168Q8NDH2 2452 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FRYLO94915 3013 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 IGHV1-18A0A0C4DH31 117 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A10PA6NDY2 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A18PA6NE21 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A16PA6NEW6 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A20PA6NIJ5 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A8PA6NJQ4 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A7PA6NKC0 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A22PA8MWA6 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A12PA8MX19 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A5PA8MXJ8 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A23PA8MXZ1 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 C12orf77C9JDV5 145 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 RNASEK-C17orf49H0YIS7 233 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 MGST3O14880 152 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 HBE1P02100 147 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A15PP0C7V4 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A13PP0C7W8 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A14PP0C7W9 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FAM90A24PP0C7X0 464 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FGF7P21781 194 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 TMEM187Q14656 261 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 PRR30Q53SZ7 412 aaPredicted RBP6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 VKORC1L1Q8N0U8 176 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 FGFRL1Q8N441 504 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 TMEM252Q8N6L7 170 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 ARV1Q9H2C2 271 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 ZNF665Q9H7R5 613 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 C19orf12Q9NSK7 152 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 ONECUT1Q9UBC0 465 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 LAMP3Q9UQV4 416 aa6.04□□□□□ -1.44
TGFBR3-202ENST00000370399 IGHV3-72A0A0B4J1Y9 119 aa6.03□□□□□ -1.44
TGFBR3-202ENST00000370399 RPS10-NUDT3A0A1W2PQS6 291 aa6.03□□□□□ -1.44
TGFBR3-202ENST00000370399 SELLP14151 372 aa6.03□□□□□ -1.44
TGFBR3-202ENST00000370399 RPS10P46783 165 aaKnown RBP6.03□□□□□ -1.44
TGFBR3-202ENST00000370399 FHITP49789 147 aa6.03□□□□□ -1.44
TGFBR3-202ENST00000370399 UBE2G2P60604 165 aa6.03□□□□□ -1.44
TGFBR3-202ENST00000370399 PRB3Q04118 309 aaPredicted RBP6.03□□□□□ -1.44
TGFBR3-202ENST00000370399 SLC38A11Q08AI6 406 aa6.03□□□□□ -1.44
TGFBR3-202ENST00000370399 PJVKQ0ZLH3 352 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms