RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SS18L1O75177 396 aaPredicted RBP15.77■□□□□ 0.11
SNX27-202ENST00000368841 WDR34Q96EX3 536 aa15.77■□□□□ 0.11
SNX27-202ENST00000368841 DUX5Q96PT3 197 aa15.77■□□□□ 0.11
SNX27-202ENST00000368841 A0A1W2PP11 408 aa15.77■□□□□ 0.11
SNX27-202ENST00000368841 HBZP02008 142 aa15.77■□□□□ 0.11
SNX27-202ENST00000368841 FCGR2BP31994 310 aaPredicted RBP15.77■□□□□ 0.11
SNX27-202ENST00000368841 LSM6P62312 80 aaKnown RBP15.77■□□□□ 0.11
SNX27-202ENST00000368841 BPIFA4PQ86YQ2 179 aa15.77■□□□□ 0.11
SNX27-202ENST00000368841 J3QT63 122 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 PSG4Q00888 419 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 IGHV1-45A0A0A0MS14 117 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 OR2A4O95047 310 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 ZNF735P0CB33 412 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 OR2A7Q96R45 310 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 MYO16Q9Y6X6 1858 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 KIAA1217Q5T5P2 1943 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 A0A1B0GU03 582 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 CRHP06850 196 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 FAM53AQ6NSI3 398 aaPredicted RBP15.76■□□□□ 0.11
SNX27-202ENST00000368841 SLC25A42Q86VD7 318 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 IGHV3OR16-13A0A075B7E8 117 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 IGHV3-74A0A0B4J1X5 117 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 PRB3Q04118 309 aaPredicted RBP15.76■□□□□ 0.11
SNX27-202ENST00000368841 MS4A5Q9H3V2 200 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 UCP2P55851 309 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 GCSAMLQ5JQS6 135 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 LYRM7Q5U5X0 104 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 PEAR1Q5VY43 1037 aaPredicted RBP15.76■□□□□ 0.11
SNX27-202ENST00000368841 A0A1W2PQD3 144 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 TMEM262E9PQX1 116 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 FTH1P19P0C7X4 201 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 GZMHP20718 246 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 LINC00299Q6ZSB3 139 aa15.76■□□□□ 0.11
SNX27-202ENST00000368841 CISD1Q9NZ45 108 aaKnown RBP15.76■□□□□ 0.11
SNX27-202ENST00000368841 CA2P00918 260 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 SNAI3Q3KNW1 292 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 WFIKKN1Q96NZ8 548 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 PCM1Q15154 2024 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 FCGR3AP08637 254 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 PXMP4Q9Y6I8 212 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 LOC107984156A0A0G2JMH3 177 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 RELBQ01201 579 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 UNQ5815/PRO19632Q6UWF5 114 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 ARL17AQ8IVW1 177 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 CCL19Q99731 98 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 MCM3APO60318 1980 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 PDE6DO43924 150 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 ZNF343Q6P1L6 599 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 DMRTA2Q96SC8 542 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 A0A1W2PRX2 142 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 ISLRO14498 428 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 OR2H2O95918 312 aa15.75■□□□□ 0.11
SNX27-202ENST00000368841 RBM11P57052 281 aaKnown RBP15.75■□□□□ 0.11
SNX27-202ENST00000368841 TMEM210A6NLX4 147 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 NUDT3O95989 172 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 TIMP4Q99727 224 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 RBKSQ9H477 322 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 A0A0J9YW62 118 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 TCF21O43680 179 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 OR10J1P30954 320 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 NANOS3P60323 173 aaKnown RBP15.74■□□□□ 0.11
SNX27-202ENST00000368841 PLPPR5Q32ZL2 321 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 INO80CQ6PI98 192 aaPredicted RBP15.74■□□□□ 0.11
SNX27-202ENST00000368841 PRSS27Q9BQR3 290 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 GPR61Q9BZJ8 451 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 OR5AC2Q9NZP5 309 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 IGHV3-49A0A0A0MS15 119 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 LRRC3BQ96PB8 259 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 TMEM229AB2RXF0 380 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 MAS1LP35410 378 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 SMRP1Q8NCR6 262 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 REPIN1Q9BWE0 567 aaKnown RBP15.74■□□□□ 0.11
SNX27-202ENST00000368841 GLI3P10071 1580 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 ATP6V0CP27449 155 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 KLF9Q13886 244 aaPredicted RBP15.74■□□□□ 0.11
SNX27-202ENST00000368841 IZUMO4Q1ZYL8 232 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 OR4A5Q8NH83 315 aa15.74■□□□□ 0.11
SNX27-202ENST00000368841 THY1P04216 161 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 FAM3BP58499 235 aaPredicted RBP15.73■□□□□ 0.11
SNX27-202ENST00000368841 DCTN5Q9BTE1 182 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 CTSBP07858 339 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 MEOX2P50222 304 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 ARF6P62330 175 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 MRPL30Q8TCC3 161 aaKnown RBP15.73■□□□□ 0.11
SNX27-202ENST00000368841 MARVELD1Q9BSK0 173 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 ABCA3Q99758 1704 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 VSIG10L2P0DP72 767 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 ERVFRD-1P60508 538 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 TMEM78Q5T7P6 136 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 CD300LDQ6UXZ3 194 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 FOXS1O43638 330 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 LRRC75BQ2VPJ9 315 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 KLK2P20151 261 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 SPAG17Q6Q759 2223 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 C7orf77A4D0Y5 90 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 HYPMO75409 117 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 LINC01560Q8TB33 94 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 PRDM6Q9NQX0 595 aa15.73■□□□□ 0.11
SNX27-202ENST00000368841 ELF5Q9UKW6 265 aaPredicted RBP15.73■□□□□ 0.11
SNX27-202ENST00000368841 DIRC3C9JPN6 131 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms