RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 FBLN7Q53RD9 439 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 C10orf113Q5VZT2 155 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 SGMS2Q8NHU3 365 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 LMX1AQ8TE12 382 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 SPTBN2O15020 2390 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 DLG5Q8TDM6 1919 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 LRP5O75197 1615 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 SAA2-SAA4A0A096LPE2 208 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF737O75373 536 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 NDUFC2O95298 119 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 C1QL3Q5VWW1 255 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 DEFB126Q9BYW3 111 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 F5P12259 2224 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 C9orf172C9J069 976 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 EGR1P18146 543 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF415Q09FC8 603 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 OSR1Q8TAX0 266 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 APIPQ96GX9 242 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 GABRG2P18507 467 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 SIGLEC12Q96PQ1 595 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 SSBP3Q9BWW4 388 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 A0A0G2JMM0 328 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 A0A1W2PPB8 328 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 A0A1W2PRD5 423 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 A0A1W2PRS3 328 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 KIR3DP1A8MWS1 328 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 TIMM23BQ5SRD1 257 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 CEBPZOSA8MTT3 80 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 RCC1LQ96I51 464 aaKnown RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 LSM4Q9Y4Z0 139 aaKnown RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 HS3ST3B1Q9Y662 390 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 P01737 135 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 DYNLRB2Q8TF09 96 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM106BQ9NUM4 274 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 SSBP2P81877 361 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 LINC01465Q8N7H1 131 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 OR10V1Q8NGI7 309 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 A0A0A6YYD5 115 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 SYNGR2O43760 224 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 IGFBP3P17936 291 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 BCL3P20749 454 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 ALKBH7Q9BT30 221 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 DECR2Q9NUI1 292 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 TINAGQ9UJW2 476 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 A0A1W2PS18 150 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 TTC32Q5I0X7 151 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 HEPN1Q6WQI6 88 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 FBXL14Q8N1E6 418 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 SLC25A40Q8TBP6 338 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 UNQ5815/PRO19632Q6UWF5 114 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 GCSAMQ8N6F7 178 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 NUDT22Q9BRQ3 303 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 AURKAIP1Q9NWT8 199 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 DNAJC25-GNG10A0A024R161 153 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 RBPMS2Q6ZRY4 209 aaKnown RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 PAAF1Q9BRP4 392 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 CCL20P78556 96 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 SCAMP4Q969E2 229 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 REPIN1Q9BWE0 567 aaKnown RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 LENEPQ9Y5L5 61 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 OR1C1Q15619 314 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 IFT172Q9UG01 1749 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 F12P00748 615 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 ASAH2BP0C7U1 165 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 VIPR2P41587 438 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 DCAF12Q5T6F0 453 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 OR4C3Q8NH37 302 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 GNG12Q9UBI6 72 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 SYNGR1O43759 233 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 LEPROTL1O95214 131 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 HTR6P50406 440 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 EFNB1P98172 346 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 DHHO43323 396 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 MPIG6BO95866 241 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 SLC25A16P16260 332 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF562Q6V9R5 426 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 GNRHR2Q96P88 292 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 QTRT1Q9BXR0 403 aaKnown RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 BCAT2O15382 392 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 SSPNQ14714 243 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 MESP1Q9BRJ9 268 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 FAM234AQ9H0X4 552 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 KNTC1P50748 2209 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 PF4P02776 101 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 AZU1P20160 251 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 C3orf36Q3SXR2 165 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF385CQ66K41 422 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 TEPPQ6URK8 271 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 OR4C13Q8NGP0 309 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 DAPP1Q9UN19 280 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 WNT3P56703 355 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF79Q15937 498 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM136Q6ZRR5 245 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 LRP12Q9Y561 859 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 ARID1AO14497 2285 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 HIVEP2P31629 2446 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 PLA2G10O15496 165 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 IL4P05112 153 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 OR8I2Q8N0Y5 310 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms