RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 SNAI3Q3KNW1 292 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 DHRS7BQ6IAN0 325 aaPredicted RBP11.61□□□□□ -0.55
LDB3-202ENST00000361373 HSD17B13Q7Z5P4 300 aaPredicted RBP11.61□□□□□ -0.55
LDB3-202ENST00000361373 ST6GAL2Q96JF0 529 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 ZNF729A6NN14 1252 aaPredicted RBP11.6□□□□□ -0.55
LDB3-202ENST00000361373 MUC1P15941 1255 aaPredicted RBP11.6□□□□□ -0.55
LDB3-202ENST00000361373 APOBEC3AP31941 199 aaPredicted RBP11.6□□□□□ -0.55
LDB3-202ENST00000361373 B2MP61769 119 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 PLAC9Q5JTB6 97 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 C10orf113Q5VZT2 155 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 CALYQ9NYX4 217 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 OTOFQ9HC10 1997 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 NTN3O00634 580 aaPredicted RBP11.6□□□□□ -0.55
LDB3-202ENST00000361373 HPXP02790 462 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 RFPL3SP0C7P2 107 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 CFHR1Q03591 330 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 OR4X1Q8NH49 305 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 DYRK2Q92630 601 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 ZIC3O60481 467 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 ZNF154Q13106 437 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 FAM74A3Q4VXF1 159 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 MUC15Q8N387 334 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 BVESQ8NE79 360 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 NPAS1Q99742 590 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 C19orf35Q6ZS72 473 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 VSIG4Q9Y279 399 aa11.6□□□□□ -0.55
LDB3-202ENST00000361373 FAM90A26D6RGX4 464 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 FOXH1O75593 365 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 SERF2P84101 59 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 SLC35E3Q7Z769 313 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 ADAD2Q8NCV1 583 aaKnown RBP11.59□□□□□ -0.55
LDB3-202ENST00000361373 SLC24A4Q8NFF2 622 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 NAT8Q9UHE5 227 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 VAX2Q9UIW0 290 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 GPR132Q9UNW8 380 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 PIKFYVEQ9Y2I7 2098 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 ZNF716A6NP11 495 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 UMODP07911 640 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 HIST1H1EP10412 219 aaKnown RBP11.59□□□□□ -0.55
LDB3-202ENST00000361373 HTR1DP28221 377 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 GFRA1P56159 465 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 SPNS3Q6ZMD2 512 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 SSX7Q7RTT5 188 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 AQP3Q92482 292 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 RHOVQ96L33 236 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 Q96M66 194 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 TMEM222Q9H0R3 208 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 NPVFQ9HCQ7 196 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 CKAP5Q14008 2032 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 ABCA7Q8IZY2 2146 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 IGHV1-69-2A0A0G2JMI3 117 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 CTXND1A0A1B0GTU2 59 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 SLC31A2O15432 143 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 KHDC3LQ587J8 217 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 OR9G1Q8NH87 305 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 NOL4LQ96MY1 436 aaPredicted RBP11.59□□□□□ -0.55
LDB3-202ENST00000361373 PATJQ8NI35 1801 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 IGLV3-32A0A0A0MS00 114 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 ATP5J2P56134 94 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 TPPP2P59282 170 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 PSG5Q15238 335 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 ZNF826PQ6ZT77 177 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 ABHD17AQ96GS6 310 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 TMPRSS5Q9H3S3 457 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 GOLT1BQ9Y3E0 138 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 TGFBR3LH3BV60 316 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 TOX4O94842 621 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 ID1P41134 155 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 C19orf57Q0VDD7 668 aa11.59□□□□□ -0.55
LDB3-202ENST00000361373 ZNF705AQ6ZN79 300 aaPredicted RBP11.59□□□□□ -0.55
LDB3-202ENST00000361373 RCC2Q9P258 522 aaKnown RBP11.59□□□□□ -0.55
LDB3-202ENST00000361373 DLL1O00548 723 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 PDE6DO43924 150 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 CXorf1O96002 111 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 OR4P4Q8NGL7 312 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 TMEM186Q96B77 213 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 SCNM1Q9BWG6 230 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 TRAPPC1Q9Y5R8 145 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 DICER1Q9UPY3 1922 aaKnown RBP11.58□□□□□ -0.56
LDB3-202ENST00000361373 PPIAL4CA0A0B4J2A2 164 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 B4DEV8 164 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 LIPFP07098 398 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 PPIAL4GP0DN37 164 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 GALR1P47211 349 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 C9orf172C9J069 976 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 RPL8P62917 257 aaKnown RBP11.58□□□□□ -0.56
LDB3-202ENST00000361373 ECSCRQ19T08 205 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 LINC00114Q6XXX2 140 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 KLHDC1Q8N7A1 406 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 TPRX1Q8N7U7 411 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 FLVCR1-AS1Q8TAF5 88 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 IL22RA2Q969J5 263 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 CACNA1IQ9P0X4 2223 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 IGSF23A1L1A6 192 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 C11orf94C9JXX5 98 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 PITX3O75364 302 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 CXCL3P19876 107 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 ATP5IP56385 69 aaPredicted RBP11.58□□□□□ -0.56
LDB3-202ENST00000361373 RPEL1Q2QD12 228 aa11.58□□□□□ -0.56
LDB3-202ENST00000361373 BSXQ3C1V8 233 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms