RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 SRSF7Q16629 238 aaKnown RBP eCLIP16.29■□□□□ 0.2
CD47-202ENST00000361309 NPBQ8NG41 125 aa16.29■□□□□ 0.2
CD47-202ENST00000361309 SMIM19Q96E16 107 aa16.29■□□□□ 0.2
CD47-202ENST00000361309 MRPS24Q96EL2 167 aaKnown RBP16.29■□□□□ 0.2
CD47-202ENST00000361309 BANF2Q9H503 90 aa16.29■□□□□ 0.2
CD47-202ENST00000361309 TPSG1Q9NRR2 321 aa16.29■□□□□ 0.2
CD47-202ENST00000361309 KIAA1456Q9P272 454 aa16.29■□□□□ 0.2
CD47-202ENST00000361309 TRAV8-7A0A075B6U6 113 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 TRBV5-5A0A0J9YX44 114 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 GPX5O75715 221 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 SC5DO75845 299 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 NDUFA3O95167 84 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 LGALS1P09382 135 aaKnown RBP16.28■□□□□ 0.2
CD47-202ENST00000361309 OR3A3P47888 321 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 C19orf54Q5BKX5 351 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 TMPRSS11AQ6ZMR5 421 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 JAGN1Q8N5M9 183 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 SELENOIQ9C0D9 397 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 CST11Q9H112 138 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 MBNL3Q9NUK0 354 aaKnown RBP16.28■□□□□ 0.2
CD47-202ENST00000361309 KCNIP1Q9NZI2 227 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 CKLFQ9UBR5 152 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 JPT1Q9UK76 154 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 ERGIC3Q9Y282 383 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 TNCP24821 2201 aa16.28■□□□□ 0.2
CD47-202ENST00000361309 LOC100130705A0A1B0GUX0 176 aa16.27■□□□□ 0.2
CD47-202ENST00000361309 CA11O75493 328 aa16.27■□□□□ 0.2
CD47-202ENST00000361309 OR8U9P0C7N5 309 aa16.27■□□□□ 0.2
CD47-202ENST00000361309 SMN1Q16637 294 aaKnown RBP16.27■□□□□ 0.2
CD47-202ENST00000361309 ZNF833PQ6ZTB9 187 aa16.27■□□□□ 0.2
CD47-202ENST00000361309 GHSRQ92847 366 aa16.27■□□□□ 0.2
CD47-202ENST00000361309 TM2D3Q9BRN9 247 aa16.27■□□□□ 0.2
CD47-202ENST00000361309 BABAM2Q9NXR7 383 aa16.27■□□□□ 0.2
CD47-202ENST00000361309 FOXA2Q9Y261 457 aaPredicted RBP16.27■□□□□ 0.2
CD47-202ENST00000361309 A3GALT2U3KPV4 340 aa16.27■□□□□ 0.2
CD47-202ENST00000361309 SAA2-SAA4A0A096LPE2 208 aa16.26■□□□□ 0.19
CD47-202ENST00000361309 LALBAP00709 142 aa16.26■□□□□ 0.19
CD47-202ENST00000361309 SAA2P0DJI9 122 aaPredicted RBP16.26■□□□□ 0.19
CD47-202ENST00000361309 FUT3P21217 361 aa16.26■□□□□ 0.19
CD47-202ENST00000361309 CRIP2P52943 208 aaPredicted RBP16.26■□□□□ 0.19
CD47-202ENST00000361309 DOC2BQ14184 412 aa16.26■□□□□ 0.19
CD47-202ENST00000361309 AWAT2Q6E213 333 aa16.26■□□□□ 0.19
CD47-202ENST00000361309 SIGIRRQ6IA17 410 aa16.26■□□□□ 0.19
CD47-202ENST00000361309 OR4C12Q96R67 309 aa16.26■□□□□ 0.19
CD47-202ENST00000361309 SLC29A1Q99808 456 aa16.26■□□□□ 0.19
CD47-202ENST00000361309 BIRC6Q9NR09 4857 aa16.26■□□□□ 0.19
CD47-202ENST00000361309 FAM90A7PA6NKC0 464 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 FAM90A23PA8MXZ1 464 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 YPEL1O60688 119 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 CRTAPO75718 401 aaPredicted RBP16.25■□□□□ 0.19
CD47-202ENST00000361309 IGHV3-11P01762 117 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 MAS1P04201 325 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 GLAP06280 429 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 MGMTP16455 207 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 FSTP19883 344 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 DCKP27707 260 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 RPS11P62280 158 aaKnown RBP eCLIP16.25■□□□□ 0.19
CD47-202ENST00000361309 CX3CL1P78423 397 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 HTD2P86397 168 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 PITPNAQ00169 270 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 LRRC36Q1X8D7 754 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 Q499Y3 187 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 ZNF660Q6AZW8 331 aaPredicted RBP16.25■□□□□ 0.19
CD47-202ENST00000361309 ZNF554Q86TJ5 538 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 HAPLN4Q86UW8 402 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 MRPL30Q8TCC3 161 aaKnown RBP16.25■□□□□ 0.19
CD47-202ENST00000361309 Q96M66 194 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 RDH12Q96NR8 316 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 YPEL2Q96QA6 119 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 FBXL15Q9H469 300 aa16.25■□□□□ 0.19
CD47-202ENST00000361309 A0A1W2PPK0 400 aa16.24■□□□□ 0.19
CD47-202ENST00000361309 LDLRAD4O15165 306 aa16.24■□□□□ 0.19
CD47-202ENST00000361309 WBP4O75554 376 aaKnown RBP16.24■□□□□ 0.19
CD47-202ENST00000361309 RGS11O94810 467 aa16.24■□□□□ 0.19
CD47-202ENST00000361309 HSPB1P04792 205 aaKnown RBP16.24■□□□□ 0.19
CD47-202ENST00000361309 IGHV4-30-4P0DP06 118 aa16.24■□□□□ 0.19
CD47-202ENST00000361309 DMKNQ6E0U4 476 aaPredicted RBP16.24■□□□□ 0.19
CD47-202ENST00000361309 FAM131AQ6UXB0 335 aa16.24■□□□□ 0.19
CD47-202ENST00000361309 TCTEX1D1Q8N7M0 179 aa16.24■□□□□ 0.19
CD47-202ENST00000361309 ZFP41Q8N8Y5 198 aa16.24■□□□□ 0.19
CD47-202ENST00000361309 ABHD5Q8WTS1 349 aa16.24■□□□□ 0.19
CD47-202ENST00000361309 C9orf16Q9BUW7 83 aa16.24■□□□□ 0.19
CD47-202ENST00000361309 NUBP2Q9Y5Y2 271 aa16.24■□□□□ 0.19
CD47-202ENST00000361309 FCN1O00602 326 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 EGR2P11161 476 aaPredicted RBP16.23■□□□□ 0.19
CD47-202ENST00000361309 PLGLAQ15195 96 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 YIF1BQ5BJH7 314 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 LY6G6FQ5SQ64 297 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 ZFP1Q6P2D0 407 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 Q8N1Y9 231 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 OR2AK2Q8NG84 335 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 GALMQ96C23 342 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 ISOC1Q96CN7 298 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 FLYWCH2Q96CP2 140 aaKnown RBP16.23■□□□□ 0.19
CD47-202ENST00000361309 OR14A2Q96R54 314 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 EDA2RQ9HAV5 297 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 CLEC2DQ9UHP7 191 aa16.23■□□□□ 0.19
CD47-202ENST00000361309 TRBV5-7A0A0A0MS05 114 aa16.22■□□□□ 0.19
CD47-202ENST00000361309 RRHO14718 337 aa16.22■□□□□ 0.19
CD47-202ENST00000361309 PDCD6O75340 191 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms