RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 VMA21Q3ZAQ7 101 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 CADM4Q8NFZ8 388 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 LOC285556D6RIA3 1793 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 C2CD4DB7Z1M9 353 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 TBX6O95947 436 aaPredicted RBP12.08□□□□□ -0.48
SMC5-201ENST00000361138 CSN3P07498 182 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 COL10A1Q03692 680 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 GUSBP11Q6P575 273 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 PMCHL1Q16048 86 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 IL36RNQ9UBH0 155 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 ANK1P16157 1881 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 P01737 135 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 OR1C1Q15619 314 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 LRRC29Q8WV35 223 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 PHF7Q9BWX1 381 aaPredicted RBP12.07□□□□□ -0.48
SMC5-201ENST00000361138 LOXL2Q9Y4K0 774 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 LYPD3O95274 346 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 FAM27BQ5VT28 67 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 ZNF818PQ6ZRF7 136 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 CLDND2Q8NHS1 167 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 OR4C12Q96R67 309 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 GBF1Q92538 1859 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 SNAI3Q3KNW1 292 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 ASPHD2Q6ICH7 369 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 SFTPA2Q8IWL1 248 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 OR8I2Q8N0Y5 310 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 OR2D3Q8NGH3 330 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 SPSB2Q99619 263 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 TXNDC17Q9BRA2 123 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 A0A087WV48 116 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 IFITM10A6NMD0 228 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 J3QT63 122 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 AMY1AP04745 511 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 HIST1H1BP16401 226 aaKnown RBP12.07□□□□□ -0.48
SMC5-201ENST00000361138 PCED1AQ9H1Q7 454 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 PXMP4Q9Y6I8 212 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 IL11RAQ14626 422 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 OR4F17Q8NGA8 305 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 ATP23Q9Y6H3 246 aa12.07□□□□□ -0.48
SMC5-201ENST00000361138 PDE4DIPQ5VU43 2346 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A10PA6NDY2 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A18PA6NE21 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A16PA6NEW6 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A20PA6NIJ5 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A8PA6NJQ4 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A7PA6NKC0 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A22PA8MWA6 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A12PA8MX19 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A5PA8MXJ8 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A23PA8MXZ1 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 SOD3P08294 240 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A15PP0C7V4 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A13PP0C7W8 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A14PP0C7W9 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A24PP0C7X0 464 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 SRFP11831 508 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 MPZP25189 248 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 AAMDCQ9H7C9 122 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 IL19Q9UHD0 177 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 SPRY3O43610 288 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 CD5P06127 495 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 OR1B1Q8NGR6 318 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 HIST1H1EP10412 219 aaKnown RBP12.06□□□□□ -0.48
SMC5-201ENST00000361138 IGHV3-13P01766 116 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 IGHV3-7P01780 117 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 RBP4P02753 201 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 ZNF124Q15973 351 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 CEACAM21Q3KPI0 293 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 SFRP2Q96HF1 295 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 GPHA2Q96T91 129 aa12.06□□□□□ -0.48
SMC5-201ENST00000361138 PSMG3Q9BT73 122 aaPredicted RBP12.06□□□□□ -0.48
SMC5-201ENST00000361138 IGHV1OR15-9A0A0B4J2B8 117 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 GRIFINA4D1Z8 144 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 LIFP15018 202 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 ZNF488Q96MN9 340 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 RHBDL1O75783 438 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 ORM2P19652 201 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 ZNF645Q8N7E2 425 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 CFHR5Q9BXR6 569 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 H0YIZ8 118 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 CDIPTO14735 213 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 OR2J3O76001 311 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 CLEC3BP05452 202 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 NXPH1P58417 271 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 CTAG1AP78358 180 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 SLC35B1P78383 322 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 WDR74Q6RFH5 385 aaPredicted RBP12.05□□□□□ -0.48
SMC5-201ENST00000361138 HEPN1Q6WQI6 88 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 ADTRPQ96IZ2 230 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 FAM117AQ9C073 453 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 WIPI2Q9Y4P8 454 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 LTBP1Q14766 1721 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 SCN3AQ9NY46 2000 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 TRAV38-1A0A0B4J264 116 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 IGLV3-21P80748 117 aaPredicted RBP12.05□□□□□ -0.48
SMC5-201ENST00000361138 PSG4Q00888 419 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 HYAL1Q12794 435 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 TM2D1Q9BX74 207 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 TMEM74BQ9NUR3 256 aa12.05□□□□□ -0.48
SMC5-201ENST00000361138 CCL3P10147 92 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms