RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PXMP4Q9Y6I8 212 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 LINC00862A6NCI5 91 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 HPRT1P00492 218 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 FCGR3AP08637 254 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 MAS1LP35410 378 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 ERVFRD-1P60508 538 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 PRSS8Q16651 343 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 DNLZQ5SXM8 178 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 AMMECR1LQ6DCA0 310 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 HOGA1Q86XE5 327 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 KRTCAP3Q53RY4 240 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 SYT8Q8NBV8 401 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 TMEM52Q8NDY8 209 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 ABHD14BQ96IU4 210 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 CD81P60033 236 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 KIAA1551Q9HCM1 1747 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 UPK3AO75631 287 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 HOXA6P31267 233 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 ABLIM2Q6H8Q1 611 aa15.97■□□□□ 0.15
SHANK1-202ENST00000359082 FAM53AQ6NSI3 398 aaPredicted RBP15.97■□□□□ 0.15
SHANK1-202ENST00000359082 GUCD1Q96NT3 240 aa15.96■□□□□ 0.15
SHANK1-202ENST00000359082 BCORQ6W2J9 1755 aa15.96■□□□□ 0.15
SHANK1-202ENST00000359082 TCF21O43680 179 aa15.96■□□□□ 0.15
SHANK1-202ENST00000359082 TMEM78Q5T7P6 136 aa15.96■□□□□ 0.15
SHANK1-202ENST00000359082 RFLNBQ8N5W9 214 aa15.96■□□□□ 0.15
SHANK1-202ENST00000359082 RSG1Q9BU20 258 aa15.96■□□□□ 0.15
SHANK1-202ENST00000359082 ST6GALNAC2Q9UJ37 374 aa15.96■□□□□ 0.15
SHANK1-202ENST00000359082 PLAUP00749 431 aa15.96■□□□□ 0.15
SHANK1-202ENST00000359082 ZNF107Q9UII5 783 aaPredicted RBP15.96■□□□□ 0.15
SHANK1-202ENST00000359082 MBD1Q9UIS9 605 aaPredicted RBP15.96■□□□□ 0.15
SHANK1-202ENST00000359082 ZNF256Q9Y2P7 627 aaPredicted RBP15.96■□□□□ 0.15
SHANK1-202ENST00000359082 CD160O95971 181 aa15.96■□□□□ 0.15
SHANK1-202ENST00000359082 RUNX1Q01196 453 aa15.96■□□□□ 0.15
SHANK1-202ENST00000359082 HCP5Q6MZN7 132 aa15.96■□□□□ 0.15
SHANK1-202ENST00000359082 RALYQ9UKM9 306 aaKnown RBP15.96■□□□□ 0.15
SHANK1-202ENST00000359082 TTC3P53804 2025 aa15.96■□□□□ 0.14
SHANK1-202ENST00000359082 CDS2O95674 445 aa15.96■□□□□ 0.14
SHANK1-202ENST00000359082 IGKV1D-16P01601 117 aa15.96■□□□□ 0.14
SHANK1-202ENST00000359082 RELBQ01201 579 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 CELA2AP08217 269 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 IL19Q9UHD0 177 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 ATXN7O15265 892 aaPredicted RBP15.95■□□□□ 0.14
SHANK1-202ENST00000359082 HBZP02008 142 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 PF4V1P10720 104 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 SMAGPQ0VAQ4 97 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 OR2V2Q96R30 315 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 CENPVL1A0A0U1RR11 272 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 FAM74A7A6NL05 159 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 OR4A5Q8NH83 315 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 GPR61Q9BZJ8 451 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 ZFP36L2P47974 494 aaKnown RBP15.95■□□□□ 0.14
SHANK1-202ENST00000359082 OR4A47Q6IF82 309 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 ZNF645Q8N7E2 425 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 PITPNC1Q9UKF7 332 aa15.95■□□□□ 0.14
SHANK1-202ENST00000359082 TMEM91Q6ZNR0 172 aa15.94■□□□□ 0.14
SHANK1-202ENST00000359082 LHFPL5Q8TAF8 219 aa15.94■□□□□ 0.14
SHANK1-202ENST00000359082 RBKSQ9H477 322 aa15.94■□□□□ 0.14
SHANK1-202ENST00000359082 KBTBD11O94819 623 aa15.94■□□□□ 0.14
SHANK1-202ENST00000359082 PLPPR5Q32ZL2 321 aa15.94■□□□□ 0.14
SHANK1-202ENST00000359082 UCP2P55851 309 aa15.94■□□□□ 0.14
SHANK1-202ENST00000359082 PSG4Q00888 419 aa15.94■□□□□ 0.14
SHANK1-202ENST00000359082 FAM106CPP0CH98 169 aa15.94■□□□□ 0.14
SHANK1-202ENST00000359082 COX6B1P14854 86 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 CLEC2AQ6UVW9 174 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 PGLYRP4Q96LB8 373 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 CHODLQ9H9P2 273 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 LAMB2P55268 1798 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 FAM181BA6NEQ2 426 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 MFAP2P55001 183 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 UBE2V2Q15819 145 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 GAPDHP04406 335 aaKnown RBP15.93■□□□□ 0.14
SHANK1-202ENST00000359082 CEACAM21Q3KPI0 293 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 SPATA45Q537H7 98 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 WDR54Q9H977 334 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 SDK1Q7Z5N4 2213 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 C10orf111Q8N326 155 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 CYB561D1Q8N8Q1 229 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 NPVFQ9HCQ7 196 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 OR5AC2Q9NZP5 309 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 RPL27AP46776 148 aaKnown RBP15.93■□□□□ 0.14
SHANK1-202ENST00000359082 DUSP15Q9H1R2 295 aaPredicted RBP15.93■□□□□ 0.14
SHANK1-202ENST00000359082 TNFSF18Q9UNG2 199 aa15.93■□□□□ 0.14
SHANK1-202ENST00000359082 OR2H2O95918 312 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 NUDT3O95989 172 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 NANOS3P60323 173 aaKnown RBP15.92■□□□□ 0.14
SHANK1-202ENST00000359082 IGHV1-45A0A0A0MS14 117 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 LOC107984156A0A0G2JMH3 177 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 ZNF98A6NK75 572 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 NDUFB4O95168 129 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 SEC11BP0C7V7 166 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 SLC25A53Q5H9E4 307 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 ARL17AQ8IVW1 177 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 DPH3Q96FX2 82 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 PLA2G10O15496 165 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 NAT2P11245 290 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 SGMS2Q8NHU3 365 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 NUDT16L1Q9BRJ7 211 aaKnown RBP15.92■□□□□ 0.14
SHANK1-202ENST00000359082 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.92■□□□□ 0.14
SHANK1-202ENST00000359082 IBA57Q5T440 356 aaKnown RBP15.92■□□□□ 0.14
SHANK1-202ENST00000359082 WDR25Q64LD2 544 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms