RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 RHBDD2Q6NTF9 364 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 PLAUP00749 431 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 GAPDHP04406 335 aaKnown RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 CT62P0C5K7 136 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 FAM216AQ8WUB2 273 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 SLIRPQ9GZT3 109 aaKnown RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 SERGEFQ9UGK8 458 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 NKX2-6A6NCS4 301 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 PGLYRP3Q96LB9 341 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 MRM2Q9UI43 246 aaKnown RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 TCRBV5S1A1TA0A578 114 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 NKG7Q16617 165 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 TEX30Q5JUR7 227 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 ZNF383Q8NA42 475 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 CCL27Q9Y4X3 112 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 J3QT63 122 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 PITX3O75364 302 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 DCTN5Q9BTE1 182 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 KCNE1BA0A087WTH5 132 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 S1PR2O95136 353 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 HOXA6P31267 233 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 GPR82Q96P67 336 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 KLK15Q9H2R5 256 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 CCL28Q9NRJ3 127 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 IGLV3-25P01717 112 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 RPL27AP46776 148 aaKnown RBP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 SNRPD3P62318 126 aaKnown RBP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 C17orf47Q8NEP4 570 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 IGHV3-72A0A0B4J1Y9 119 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 CRHP06850 196 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 FGF9P31371 208 aaPredicted RBP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 TNFSF10P50591 281 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 RASL10BQ96S79 203 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 CX3CL1P78423 397 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 KIF26BQ2KJY2 2108 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 GUCD1Q96NT3 240 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 ZDHHC8Q9ULC8 765 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 TMEM183AQ8IXX5 376 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 TSPOP30536 169 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 ZNF56Q15929 161 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 LYZL2Q7Z4W2 148 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 TMEM70Q9BUB7 260 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 COL6A6A6NMZ7 2263 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 PPIAL4EA0A075B759 164 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 PPIAL4DF5H284 164 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 PPIAL4FP0DN26 164 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 EWSR1Q01844 656 aaKnown RBP eCLIP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 SRSF5Q13243 272 aaKnown RBP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 PPIAL4AQ9Y536 164 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 RGP1Q92546 391 aaPredicted RBP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 WDFY2Q96P53 400 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 HSPB7Q9UBY9 170 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 OR2H1Q9GZK4 316 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 OPN4Q9UHM6 478 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 PLA2G2FQ9BZM2 168 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 TBX21Q9UL17 535 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 CDS2O95674 445 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 PRDX2P32119 198 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 SPATA45Q537H7 98 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 UNQ9370/PRO34162Q6UXP9 181 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 PSMB11A5LHX3 300 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 TMEM136Q6ZRR5 245 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 KIR2DL4Q99706 377 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 ALKBH7Q9BT30 221 aaPredicted RBP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 UCNP55089 124 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 SGMS2Q8NHU3 365 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 FRRS1LQ9P0K9 344 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 TSPAN2O60636 221 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 FCGR2BP31994 310 aaPredicted RBP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 SHISA5Q8N114 240 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 METTL1Q9UBP6 276 aaKnown RBP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 F11RQ9Y624 299 aaKnown RBP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 ANOS1P23352 680 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 JKAMPQ9P055 326 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 NEU3Q9UQ49 428 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 C10orf128Q5T292 105 aa5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 CENPVQ7Z7K6 275 aaPredicted RBP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 TP53BP1Q12888 1972 aaPredicted RBP5.05□□□□□ -1.6
SRGAP1-201ENST00000355086 hCG_38984A0A1B0GV85 526 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 LIPT2A6NK58 231 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 FCGR3AP08637 254 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 AMER3Q8N944 861 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 GMPPAQ96IJ6 420 aaPredicted RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 MIOXQ9UGB7 285 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 H3BQ15 152 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 CCL8P80075 99 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 CXorf66Q5JRM2 361 aaPredicted RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 CBLN3Q6UW01 205 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 SH2D5Q6ZV89 423 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 NPVFQ9HCQ7 196 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 CXCL10P02778 98 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 SURF2Q15527 256 aaPredicted RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 C10orf126Q8N4M7 172 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 LRP6O75581 1613 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 TRAV39A0A0B4J263 110 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 NXPH1P58417 271 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 C1orf185Q5T7R7 199 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 RGPD2P0DJD1 1756 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 SPTAN1Q13813 2472 aaKnown RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 ADAD2Q8NCV1 583 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms