RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SMPD2O60906 423 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 NAPSAO96009 420 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 CCL1P22362 96 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 Q0VG73 95 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 EIF3IQ13347 325 aaKnown RBP11.32□□□□□ -0.6
IFT88-202ENST00000351808 CCL4L1Q8NHW4 92 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 LYZL4Q96KX0 146 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 WDR61Q9GZS3 305 aaKnown RBP11.32□□□□□ -0.6
IFT88-202ENST00000351808 SLC7A10Q9NS82 523 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 UNC80Q8N2C7 3258 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 ARHGEF17Q96PE2 2063 aaPredicted RBP11.32□□□□□ -0.6
IFT88-202ENST00000351808 CORTO00230 105 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 TAX1BP3O14907 124 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 KITLGP21583 273 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 CTGFP29279 349 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 ZNF90Q03938 601 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 MFAP5Q13361 173 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 ACSM6Q6P461 480 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 Q6ZPA2 131 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 ZNF818PQ6ZRF7 136 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 GAPTQ8N292 157 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 KLHDC7BQ96G42 594 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 SFRP2Q96HF1 295 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 LRRC3BQ96PB8 259 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 FGF22Q9HCT0 170 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 MRPL27Q9P0M9 148 aaKnown RBP11.32□□□□□ -0.6
IFT88-202ENST00000351808 TP73-AS1Q9UF72 201 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 UBE2L5PA0A1B0GUS4 154 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 C11orf94C9JXX5 98 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 CLPSP04118 112 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 DRD3P35462 400 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 IER3P46695 156 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 THBS3P49746 956 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 PMP22Q01453 160 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 ZNF77Q15935 545 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 SMIM21Q3B7S5 101 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 KRTCAP3Q53RY4 240 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 LRRC10Q5BKY1 277 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 RAET1LQ5VY80 246 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 MUC15Q8N387 334 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 OR52L2PQ8NGH6 319 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 WFDC12Q8WWY7 111 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 OR5P3Q8WZ94 311 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 MYO7AQ13402 2215 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 NDUFS8O00217 210 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 NDUFB4O95168 129 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 DEFA4P12838 97 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 DAP3P51398 398 aaKnown RBP11.31□□□□□ -0.6
IFT88-202ENST00000351808 PRRX1P54821 245 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 ASCC3Q8N3C0 2202 aaKnown RBP11.31□□□□□ -0.6
IFT88-202ENST00000351808 PNKDQ8N490 385 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 OR5B3Q8NH48 314 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 TAF15Q92804 592 aaKnown RBP eCLIP11.31□□□□□ -0.6
IFT88-202ENST00000351808 SARAFQ96BY9 339 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 SLC17A4Q9Y2C5 497 aa11.31□□□□□ -0.6
IFT88-202ENST00000351808 NCOA6Q14686 2063 aaPredicted RBP11.31□□□□□ -0.6
IFT88-202ENST00000351808 MDFIC2A0A1B0GVS7 189 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 GNB1P62873 340 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 ARG2P78540 354 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 RELBQ01201 579 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 HLA-DRB5Q30154 266 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 PIGYQ3MUY2 71 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 PRAMEF20Q5VT98 475 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 FAM19A2Q8N3H0 131 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 RCHY1Q96PM5 261 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 SF3B5Q9BWJ5 86 aaKnown RBP11.3□□□□□ -0.6
IFT88-202ENST00000351808 HDAC8Q9BY41 377 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 PSENENQ9NZ42 101 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 COL4A2P08572 1712 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 SZT2Q5T011 3432 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 ZNF816-ZNF321PA0A0X1KG74 233 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 A0A1W2PS18 150 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 ADH5P11766 374 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 NHLH1Q02575 133 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 MPV17L2Q567V2 206 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 RAB40CQ96S21 281 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 PIGLQ9Y2B2 252 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 SEC16AO15027 2179 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 SNURFLB1AK76 121 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 TRAF3IP2O43734 574 aaPredicted RBP11.3□□□□□ -0.6
IFT88-202ENST00000351808 CTXN2P0C2S0 81 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 UCP1P25874 307 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 ZNF83P51522 516 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 KIAA1644Q3SXP7 199 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.3□□□□□ -0.6
IFT88-202ENST00000351808 BAHD1Q8TBE0 780 aaPredicted RBP11.3□□□□□ -0.6
IFT88-202ENST00000351808 ZC2HC1AQ96GY0 325 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 CLEC1BQ9P126 229 aa11.3□□□□□ -0.6
IFT88-202ENST00000351808 ERRFI1Q9UJM3 462 aaPredicted RBP11.3□□□□□ -0.6
IFT88-202ENST00000351808 Q6ZRM9 215 aa11.29□□□□□ -0.6
IFT88-202ENST00000351808 OR1K1Q8NGR3 316 aa11.29□□□□□ -0.6
IFT88-202ENST00000351808 ZNF721Q8TF20 911 aa11.29□□□□□ -0.6
IFT88-202ENST00000351808 TMEM234Q8WY98 164 aa11.29□□□□□ -0.6
IFT88-202ENST00000351808 FAM131CQ96AQ9 280 aa11.29□□□□□ -0.6
IFT88-202ENST00000351808 RP1P56715 2156 aa11.29□□□□□ -0.6
IFT88-202ENST00000351808 SLC17A3O00476 420 aa11.29□□□□□ -0.6
IFT88-202ENST00000351808 TOX4O94842 621 aa11.29□□□□□ -0.6
IFT88-202ENST00000351808 PPP1CAP62136 330 aa11.29□□□□□ -0.6
IFT88-202ENST00000351808 STUMQ69YW2 141 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms