RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 CRISPLD2Q9H0B8 497 aa12.13□□□□□ -0.47
RLIM-202ENST00000349225 PATZ1Q9HBE1 687 aaKnown RBP12.13□□□□□ -0.47
RLIM-202ENST00000349225 CACNG5Q9UF02 275 aa12.13□□□□□ -0.47
RLIM-202ENST00000349225 ESDP10768 282 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 MSR1P21757 451 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 FFAR4Q5NUL3 377 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 TMPRSS7Q7RTY8 843 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 WDR5BQ86VZ2 330 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 GJC3Q8NFK1 279 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 C10orf35Q96D05 121 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 SYNGR2O43760 224 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 NAPSAO96009 420 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 CRYAAP02489 173 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 CAPZBP47756 277 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 YPEL3P61236 119 aaPredicted RBP12.12□□□□□ -0.47
RLIM-202ENST00000349225 GNB1P62873 340 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 PSG4Q00888 419 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 RABEPKQ7Z6M1 372 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 SGMS2Q8NHU3 365 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 MRGPRX1Q96LB2 322 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 IL36RNQ9UBH0 155 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 F2RP25116 425 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 SHBQ15464 509 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 BORCS8Q96FH0 119 aa12.12□□□□□ -0.47
RLIM-202ENST00000349225 UNC13CQ8NB66 2214 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 ASXL3Q9C0F0 2248 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 NXPH2O95156 264 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 VENTXO95231 258 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 IGKV1-5P01602 117 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 CD38P28907 300 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 TPPP2P59282 170 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 ZNF468Q5VIY5 522 aaPredicted RBP12.11□□□□□ -0.47
RLIM-202ENST00000349225 UNQ5815/PRO19632Q6UWF5 114 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 ZNF709Q8N972 641 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 PINX1Q96BK5 328 aaKnown RBP12.11□□□□□ -0.47
RLIM-202ENST00000349225 PLEK2Q9NYT0 353 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 SLC45A2Q9UMX9 530 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 HSPB6O14558 160 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 HYPMO75409 117 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 FOXL1Q12952 345 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 FOXL2NBQ6ZUU3 175 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 ORAOV1Q8WV07 137 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 OXGR1Q96P68 337 aa12.11□□□□□ -0.47
RLIM-202ENST00000349225 PTGDSP41222 190 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 KLF3P57682 345 aaPredicted RBP12.1□□□□□ -0.47
RLIM-202ENST00000349225 RANP62826 216 aaKnown RBP12.1□□□□□ -0.47
RLIM-202ENST00000349225 SPANXN5Q5MJ07 72 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 PCSK4Q6UW60 755 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 C20orf204Q6ZNR8 217 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 SAXO1Q8IYX7 474 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 OR2M3Q8NG83 312 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 C3orf80F5H4A9 247 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 DRD1P21728 446 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 CRYGSP22914 178 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 PAFAH1B2P68402 229 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 TMEM42Q69YG0 159 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 OR5AU1Q8NGC0 362 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 WIPI2Q9Y4P8 454 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 OR6C6A6NF89 314 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 IGLV2-14P01704 120 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 ATP5G3P48201 142 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 YPEL5P62699 121 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 PMP22Q01453 160 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 MSMO1Q15800 293 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 TRIM61Q5EBN2 209 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 ADPRHL1Q8NDY3 354 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 NEIL1Q96FI4 390 aaPredicted RBP12.1□□□□□ -0.47
RLIM-202ENST00000349225 ZDHHC11Q9H8X9 412 aa12.1□□□□□ -0.47
RLIM-202ENST00000349225 TOMM40O96008 361 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 NRASP01111 189 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 VEGFBP49765 207 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 OR8G2PQ6IF36 304 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 RYDENQ9NUL5 291 aaKnown RBP12.09□□□□□ -0.47
RLIM-202ENST00000349225 IL36GQ9NZH8 169 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 LAMTOR2Q9Y2Q5 125 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 IGHV3-15A0A0B4J1V0 119 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 M0QZ24 198 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 IGLC2P0DOY2 106 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 IGLC3P0DOY3 106 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 UBE2V1Q13404 147 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 SPATA45Q537H7 98 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 LHFPL2Q6ZUX7 228 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 KMT5CQ86Y97 462 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 OR6C1Q96RD1 312 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 ALKBH7Q9BT30 221 aaPredicted RBP12.09□□□□□ -0.47
RLIM-202ENST00000349225 TRAV34A0A0B4J273 112 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 CTXND1A0A1B0GTU2 59 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 C11orf94C9JXX5 98 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 PATE4P0C8F1 98 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 MAJINQ3KP22 176 aa12.09□□□□□ -0.47
RLIM-202ENST00000349225 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.09□□□□□ -0.47
RLIM-202ENST00000349225 FAM103A1Q9BTL3 118 aaKnown RBP12.09□□□□□ -0.47
RLIM-202ENST00000349225 FRYQ5TBA9 3013 aa12.08□□□□□ -0.47
RLIM-202ENST00000349225 AQP7P3A6NL99 342 aa12.08□□□□□ -0.48
RLIM-202ENST00000349225 SLC38A11Q08AI6 406 aa12.08□□□□□ -0.48
RLIM-202ENST00000349225 CNN3Q15417 329 aaKnown RBP12.08□□□□□ -0.48
RLIM-202ENST00000349225 SLC25A53Q5H9E4 307 aa12.08□□□□□ -0.48
RLIM-202ENST00000349225 Q6ZS49 121 aa12.08□□□□□ -0.48
RLIM-202ENST00000349225 C1orf174Q8IYL3 243 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms