RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 MARVELD3Q96A59 401 aa13.13□□□□□ -0.31
CUL3-202ENST00000344951 ELF5Q9UKW6 265 aaPredicted RBP13.13□□□□□ -0.31
CUL3-202ENST00000344951 NKX2-6A6NCS4 301 aa13.13□□□□□ -0.31
CUL3-202ENST00000344951 NPIPB6E9PJ23 425 aa13.13□□□□□ -0.31
CUL3-202ENST00000344951 RPL31P62899 125 aaKnown RBP13.13□□□□□ -0.31
CUL3-202ENST00000344951 LHFPL5Q8TAF8 219 aa13.13□□□□□ -0.31
CUL3-202ENST00000344951 ABHD14BQ96IU4 210 aa13.13□□□□□ -0.31
CUL3-202ENST00000344951 PHLDA3Q9Y5J5 127 aa13.13□□□□□ -0.31
CUL3-202ENST00000344951 SRD5A2P31213 254 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 HINT1P49773 126 aaPredicted RBP13.12□□□□□ -0.31
CUL3-202ENST00000344951 ZIC1Q15915 447 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 S4R3C0 116 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 DIRC3C9JPN6 131 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 CXCL2P19875 107 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 EFNB2P52799 333 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 VN1R4Q7Z5H5 301 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 RCC2Q9P258 522 aaKnown RBP13.12□□□□□ -0.31
CUL3-202ENST00000344951 DOCK2Q92608 1830 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 LMX1BO60663 402 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 PRSS27Q9BQR3 290 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 SIRT7Q9NRC8 400 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 ZFP30Q9Y2G7 519 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 TRA2AQ13595 282 aaKnown RBP eCLIP13.12□□□□□ -0.31
CUL3-202ENST00000344951 DEGS2Q6QHC5 323 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 PPIAL4EA0A075B759 164 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 PPIAL4DF5H284 164 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 TSPAN2O60636 221 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 PPIAL4FP0DN26 164 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 CKS2P33552 79 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 GZMMP51124 257 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 OR4A5Q8NH83 315 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 PPIAL4AQ9Y536 164 aa13.12□□□□□ -0.31
CUL3-202ENST00000344951 ISLRO14498 428 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 SIAH2O43255 324 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 KBTBD11O94819 623 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 SUMO2P61956 95 aaKnown RBP13.11□□□□□ -0.31
CUL3-202ENST00000344951 ZNF707Q96C28 371 aaPredicted RBP13.11□□□□□ -0.31
CUL3-202ENST00000344951 RAX2Q96IS3 184 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 CYB5R3P00387 301 aaPredicted RBP13.11□□□□□ -0.31
CUL3-202ENST00000344951 IL24Q13007 206 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 CADM4Q8NFZ8 388 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 FAM60AQ9NP50 221 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 MBD1Q9UIS9 605 aaPredicted RBP13.11□□□□□ -0.31
CUL3-202ENST00000344951 AHDC1Q5TGY3 1603 aaPredicted RBP13.11□□□□□ -0.31
CUL3-202ENST00000344951 PROB1E7EW31 1015 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 LYZL2Q7Z4W2 148 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 CCL19Q99731 98 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 NPFFO15130 113 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 SYNGR1O43759 233 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 EPHA8P29322 1005 aaPredicted RBP13.11□□□□□ -0.31
CUL3-202ENST00000344951 ADTRPQ96IZ2 230 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 H3BQ15 152 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 HRKO00198 91 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 OR2A4O95047 310 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 COX6CP09669 75 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 GLULP15104 373 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 RCC1P18754 421 aaPredicted RBP13.11□□□□□ -0.31
CUL3-202ENST00000344951 OR2A7Q96R45 310 aa13.11□□□□□ -0.31
CUL3-202ENST00000344951 CITED2Q99967 270 aaPredicted RBP13.11□□□□□ -0.31
CUL3-202ENST00000344951 B4DEV8 164 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 MBPP02686 304 aaPredicted RBP13.1□□□□□ -0.31
CUL3-202ENST00000344951 CNTRLQ7Z7A1 2325 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 CXorf51AA0A1B0GTR3 108 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 A0A1B0GV72 72 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 hCG_38984A0A1B0GV85 526 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 ERVFRD-1P60508 538 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 CXCL10P02778 98 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 CX3CL1P78423 397 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 SLC35E3Q7Z769 313 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 ANAPC16Q96DE5 110 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 WNT5BQ9H1J7 359 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 TOMM7Q9P0U1 55 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 FAM106CPP0CH98 169 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 ZNF658BQ4V348 819 aaPredicted RBP13.1□□□□□ -0.31
CUL3-202ENST00000344951 DIRC2Q96SL1 478 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 PIPOXQ9P0Z9 390 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 NINQ8N4C6 2090 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 NHSQ6T4R5 1651 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 CD160O95971 181 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 TTC32Q5I0X7 151 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 OR1L8Q8NGR8 309 aa13.1□□□□□ -0.31
CUL3-202ENST00000344951 ITLN2Q8WWU7 325 aaPredicted RBP13.1□□□□□ -0.31
CUL3-202ENST00000344951 CISD3P0C7P0 127 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 PNRC1Q12796 327 aaPredicted RBP13.09□□□□□ -0.31
CUL3-202ENST00000344951 TEPPQ6URK8 271 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 RASL10BQ96S79 203 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 SIRT4Q9Y6E7 314 aaPredicted RBP13.09□□□□□ -0.31
CUL3-202ENST00000344951 ZNF98A6NK75 572 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 B4E171 279 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 FXYD3Q14802 87 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 DCAF12L2Q5VW00 463 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 OR52M1Q8NGK5 317 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 PIMREGQ9BSJ6 248 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 CEACAM18A8MTB9 384 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 ATP5J2P56134 94 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 EWSR1Q01844 656 aaKnown RBP eCLIP13.09□□□□□ -0.31
CUL3-202ENST00000344951 TMEM38BQ9NVV0 291 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 PRNDQ9UKY0 176 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 SELENOKQ9Y6D0 94 aa13.09□□□□□ -0.31
CUL3-202ENST00000344951 CXorf1O96002 111 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms