RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TMEM56Q96MV1 263 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 VKORC1Q9BQB6 163 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 ELOVL5Q9NYP7 299 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 RFNGQ9Y644 331 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 TMEM56-RWDD3S4R434 201 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 SIAH2O43255 324 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 TMEM50AO95807 157 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 GYPAP02724 150 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 C4BPBP20851 252 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 IL2RGP31785 369 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 BRWD1-AS2P59051 145 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 ZNF585BQ52M93 769 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 SHEQ5VZ18 495 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 SLC35E4Q6ICL7 350 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 FIP1L1Q6UN15 594 aaKnown RBP6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 DMRTC2Q8IXT2 367 aaPredicted RBP6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 DMBX1Q8NFW5 382 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 TMED6Q8WW62 240 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 CCL13Q99616 98 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 PLA2G2EQ9NZK7 142 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 RCL1Q9Y2P8 373 aaKnown RBP6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 CELSR2Q9HCU4 2923 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 A0A1W2PPE3 182 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 SHISA9B4DS77 424 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 E7EQL1 145 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 C15orf65H3BRN8 121 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 ST8SIA5O15466 376 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 PROP1O75360 226 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 FCN3O75636 299 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 RRASP10301 218 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 UCP1P25874 307 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 RPL12P30050 165 aaKnown RBP6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 ZNF134P52741 427 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 TMEM33P57088 247 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 RAB14P61106 215 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 C3orf36Q3SXR2 165 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 ESCO2Q56NI9 601 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 C1orf229Q6ZS94 237 aaPredicted RBP6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 FAM216BQ8N7L0 139 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 AQP10Q96PS8 301 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 REG4Q9BYZ8 158 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 OR2D2Q9H210 308 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 WFDC1Q9HC57 220 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 GLS2Q9UI32 602 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 OOEPA6NGQ2 149 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 IFNL4K9M1U5 179 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 CFHR2P36980 270 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 CA7P43166 264 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 UCNP55089 124 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 RND3P61587 244 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 ADORA2A-AS1P86434 159 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 RBPJQ06330 500 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 KLRB1Q12918 225 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 NMSQ5H8A3 153 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 C1orf174Q8IYL3 243 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 NUP37Q8NFH4 326 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 OR4D5Q8NGN0 318 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 RBPMSQ93062 196 aaKnown RBP6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 DNTTIP1Q9H147 329 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 ZC4H2Q9NQZ6 224 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 KCNIP1Q9NZI2 227 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 IL19Q9UHD0 177 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 AUP1Q9Y679 476 aa6.16□□□□□ -1.42
SRFBP1-201ENST00000339397 ODAMA1E959 279 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 NPIPB11E5RHQ5 1161 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 I3L521 148 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 K7N7A8 449 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 FBXO24O75426 580 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 SCO1O75880 301 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 SELENOVP59797 346 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 CCL17Q92583 94 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 GPR146Q96CH1 333 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 AGMATQ9BSE5 352 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 ZNRD1Q9P1U0 126 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 PSG11Q9UQ72 335 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 TMED3Q9Y3Q3 217 aa6.15□□□□□ -1.42
SRFBP1-201ENST00000339397 RAI1Q7Z5J4 1906 aaPredicted RBP6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 MED19A0JLT2 244 aaPredicted RBP6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 FAM24AA6NFZ4 105 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 LINC00473A8K010 186 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 C17orf100A8MU93 164 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 LYNX1G3V0Z9 82 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 H0Y980 276 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 SSSCA1O60232 199 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 MMP23AO75900 390 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 IGKV1-5P01602 117 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 LYNX1P0DP58 116 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 GATA4P43694 442 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 ID4P47928 161 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 TOR2AQ5JU69 321 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 UNQ6494/PRO21346Q6UXR6 183 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 MOB1BQ7L9L4 216 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 ODF3L1Q8IXM7 274 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 RNF7Q9UBF6 113 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 FBXL17Q9UF56 701 aa6.15□□□□□ -1.43
SRFBP1-201ENST00000339397 DSCAML1Q8TD84 2053 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 MALRD1Q5VYJ5 2156 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 C17orf98A8MV24 154 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 H3BP45 60 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms