RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 COX6B1P14854 86 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 EWSR1Q01844 656 aaKnown RBP eCLIP14.37□□□□□ -0.11
PTCH1-201ENST00000331920 DPTQ07507 201 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 MRGPRGQ86SM5 289 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 BIVMQ86UB2 503 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 SLC17A5Q9NRA2 495 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 A0A0A6YYD5 115 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 SMIM6P0DI80 62 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 LYZL2Q7Z4W2 148 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 PDLIM7Q9NR12 457 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 METTL1Q9UBP6 276 aaKnown RBP14.37□□□□□ -0.11
PTCH1-201ENST00000331920 NDUFB4O95168 129 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 RCC1P18754 421 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-201ENST00000331920 MRPL30Q8TCC3 161 aaKnown RBP14.37□□□□□ -0.11
PTCH1-201ENST00000331920 RNF122Q9H9V4 155 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 AKIP1Q9NQ31 210 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 PLPP3O14495 311 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 FAM3BP58499 235 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-201ENST00000331920 AMER3Q8N944 861 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 KIR2DL4Q99706 377 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 CXCL16Q9H2A7 254 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 RPL31P62899 125 aaKnown RBP14.36□□□□□ -0.11
PTCH1-201ENST00000331920 TRIP6Q15654 476 aaKnown RBP14.36□□□□□ -0.11
PTCH1-201ENST00000331920 TMEM177Q53S58 311 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 ZG16BQ96DA0 208 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 AKAP11Q9UKA4 1901 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 IGHV3OR16-10A0A075B7F0 116 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 SNAI3Q3KNW1 292 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 CENPVQ7Z7K6 275 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-201ENST00000331920 ST6GAL2Q96JF0 529 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 IGHV3-66A0A0C4DH42 116 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 WFIKKN1Q96NZ8 548 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 PCP4P48539 62 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 GALNT14Q96FL9 552 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 CA1P00915 261 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-201ENST00000331920 HIST1H1AQ02539 215 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-201ENST00000331920 PQLC2Q6ZP29 291 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 SYT11Q9BT88 431 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 CDC42EP3Q9UKI2 254 aa14.36□□□□□ -0.11
PTCH1-201ENST00000331920 HOXA6P31267 233 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 CNRIP1Q96F85 164 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-201ENST00000331920 hCG_38984A0A1B0GV85 526 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 MRPL18Q9H0U6 180 aaKnown RBP14.35□□□□□ -0.11
PTCH1-201ENST00000331920 KIAA1217Q5T5P2 1943 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 ARRDC5A6NEK1 342 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 LEMD1Q68G75 181 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 CCDC144NLQ6NUI1 221 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 IGHV5-51A0A0C4DH38 117 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 PNLIPP16233 465 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 ALKAL1Q6UXT8 129 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 OR2V2Q96R30 315 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 PXMP4Q9Y6I8 212 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 SNAI2O43623 268 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 DDX60Q8IY21 1712 aaKnown RBP14.35□□□□□ -0.11
PTCH1-201ENST00000331920 CLDN14O95500 239 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 PPYP01298 95 aa14.35□□□□□ -0.11
PTCH1-201ENST00000331920 NTN1O95631 604 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 ACVR1Q04771 509 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 MRGPRX3Q96LB0 322 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 SIRT7Q9NRC8 400 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 LEUTXA8MZ59 168 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 SRSF12Q8WXF0 261 aaKnown RBP14.34□□□□□ -0.11
PTCH1-201ENST00000331920 NXT2Q9NPJ8 142 aaKnown RBP14.34□□□□□ -0.11
PTCH1-201ENST00000331920 CXorf65A6NEN9 183 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 APOMO95445 188 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 PTP4A1Q93096 173 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 ZNF714Q96N38 554 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 AKAP6Q13023 2319 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 A0A1B0GV90 55 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 TCRBV5S2A0A599 114 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 RBMY1BA6NDE4 496 aaKnown RBP14.34□□□□□ -0.11
PTCH1-201ENST00000331920 RBMY1EA6NEQ0 496 aaKnown RBP14.34□□□□□ -0.11
PTCH1-201ENST00000331920 LMO7DNF2Z398 122 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 H3BTX0 84 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 RBMY1DP0C7P1 496 aaKnown RBP14.34□□□□□ -0.11
PTCH1-201ENST00000331920 RBMY1A1P0DJD3 496 aaKnown RBP14.34□□□□□ -0.11
PTCH1-201ENST00000331920 RBMY1CP0DJD4 496 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 EPHA8P29322 1005 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-201ENST00000331920 CDKN2AP42771 156 aaKnown RBP14.34□□□□□ -0.11
PTCH1-201ENST00000331920 EIF3IQ13347 325 aaKnown RBP14.34□□□□□ -0.11
PTCH1-201ENST00000331920 PLPP2O43688 288 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 CYB561D1Q8N8Q1 229 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 ASB10Q8WXI3 467 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 LINC00862A6NCI5 91 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 K7N7A8 449 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 DXOO77932 396 aaKnown RBP14.34□□□□□ -0.11
PTCH1-201ENST00000331920 MMP16P51512 607 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 SFTA2Q6UW10 78 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 SPNS2Q8IVW8 549 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 EDA2RQ9HAV5 297 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 FAM206AQ9NX38 181 aa14.34□□□□□ -0.11
PTCH1-201ENST00000331920 AMY1AP04745 511 aa14.33□□□□□ -0.11
PTCH1-201ENST00000331920 NDUFA3O95167 84 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 SLC25A1P53007 311 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 STARD6P59095 220 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 ZNHIT1O43257 154 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 S1PR2O95136 353 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 CKS1BP61024 79 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 PRICKLE4Q2TBC4 344 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 Q6ZS52 159 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms