RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 OR1A1Q9P1Q5 309 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 RPH3ALQ9UNE2 315 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 CREBBPQ92793 2442 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 A0A0A6YYD4 124 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 A8MXK9 166 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 HRASP01112 189 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 GYPAP02724 150 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 TAGLN2P37802 199 aaKnown RBP8.13□□□□□ -1.11
SS18L1-201ENST00000331758 MPV17P39210 176 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 RAB7AP51149 207 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 DYNLT3P51808 116 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 ERHP84090 104 aaKnown RBP8.13□□□□□ -1.11
SS18L1-201ENST00000331758 NHLH2Q02577 135 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 HIST3H3Q16695 136 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 AUP1Q9Y679 476 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 CHD7Q9P2D1 2997 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 A0A1W2PRD5 423 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 A0A1W2PRF3 423 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 A0A1W2PRM7 423 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 ETV2O00321 342 aaPredicted RBP8.13□□□□□ -1.11
SS18L1-201ENST00000331758 MGST3O14880 152 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 TGOLN2O43493 480 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 GLIPR1P48060 266 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 IL24Q13007 206 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 IZUMO4Q1ZYL8 232 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 R3HDM4Q96D70 268 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 AKR1E2Q96JD6 320 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 SLC35E1Q96K37 410 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 SFXN3Q9BWM7 321 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 UQCC1Q9NVA1 299 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 ONECUT1Q9UBC0 465 aa8.13□□□□□ -1.11
SS18L1-201ENST00000331758 CRYM-AS1A6NIL9 109 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 RNASEK-C17orf49H0YIS7 233 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 H0YL77 283 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 OR4A8P0C604 315 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 COX5AP20674 150 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 RPL31P62899 125 aaKnown RBP8.12□□□□□ -1.11
SS18L1-201ENST00000331758 ZNF660Q6AZW8 331 aaPredicted RBP8.12□□□□□ -1.11
SS18L1-201ENST00000331758 SLC16A13Q7RTY0 426 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 WDFY1Q8IWB7 410 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 SEC11CQ9BY50 192 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 TIMM8BQ9Y5J9 83 aaPredicted RBP8.12□□□□□ -1.11
SS18L1-201ENST00000331758 TRAV20A0A0B4J274 112 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 A8MXE2 369 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 CDRT15L2A8MXV6 281 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 TRIM77I1YAP6 450 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 SOX15O60248 233 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 RPS2P15880 293 aaKnown RBP8.12□□□□□ -1.11
SS18L1-201ENST00000331758 CXorf66Q5JRM2 361 aaPredicted RBP8.12□□□□□ -1.11
SS18L1-201ENST00000331758 TIMM23BQ5SRD1 257 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 C1orf174Q8IYL3 243 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 NCOR2Q9Y618 2525 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 IGKV1-12A0A0C4DH73 117 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 IGKV1D-12P01611 117 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 MMP7P09237 267 aaPredicted RBP8.12□□□□□ -1.11
SS18L1-201ENST00000331758 P2RY1P47900 373 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 SUB1P53999 127 aaKnown RBP eCLIP8.12□□□□□ -1.11
SS18L1-201ENST00000331758 EWSR1Q01844 656 aaKnown RBP eCLIP8.12□□□□□ -1.111e-6■■■■□ 23.1
SS18L1-201ENST00000331758 GUK1Q16774 197 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 FAM166AQ6J272 317 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 ETV3LQ6ZN32 361 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 RTN4RL2Q86UN3 420 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 RPUSD4Q96CM3 377 aaKnown RBP8.12□□□□□ -1.11
SS18L1-201ENST00000331758 TMEM222Q9H0R3 208 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 KCNIP2Q9NS61 270 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 SLC35D1Q9NTN3 355 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 RCC2Q9P258 522 aaKnown RBP8.12□□□□□ -1.11
SS18L1-201ENST00000331758 FBLN5Q9UBX5 448 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 ZMAT5Q9UDW3 170 aaKnown RBP8.12□□□□□ -1.11
SS18L1-201ENST00000331758 PRR14LQ5THK1 2151 aa8.12□□□□□ -1.11
SS18L1-201ENST00000331758 PPP1R2P9O14990 202 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 SCAF4O95104 1147 aaKnown RBP8.11□□□□□ -1.11
SS18L1-201ENST00000331758 ADH4P08319 380 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 KIAA0141Q14154 515 aaPredicted RBP8.11□□□□□ -1.11
SS18L1-201ENST00000331758 FAM201AQ5SY85 155 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 NSUN5P2Q63ZY6 315 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 ACY3Q96HD9 319 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 ACTR3CQ9C0K3 210 aaPredicted RBP8.11□□□□□ -1.11
SS18L1-201ENST00000331758 IL36GQ9NZH8 169 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 PPIAL4EA0A075B759 164 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 PPIAL4DF5H284 164 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 CYB5R3P00387 301 aaPredicted RBP8.11□□□□□ -1.11
SS18L1-201ENST00000331758 MBPP02686 304 aaPredicted RBP8.11□□□□□ -1.11
SS18L1-201ENST00000331758 PPIAL4FP0DN26 164 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 SLC25A6P12236 298 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 NUBP1P53384 320 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 NDUFA6P56556 154 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 C15orf54Q8N8G6 183 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 ZNRF1Q8ND25 227 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 USB1Q9BQ65 265 aaKnown RBP8.11□□□□□ -1.11
SS18L1-201ENST00000331758 PPIAL4AQ9Y536 164 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 IGKV1D-8A0A087WSZ0 117 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 IGHV2OR16-5A0A0B4J2B6 119 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 E9PLN8 166 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 J3QW42 95 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 PGLYRP1O75594 196 aaPredicted RBP8.11□□□□□ -1.11
SS18L1-201ENST00000331758 IL18BPO95998 194 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 TDGF1P13385 188 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 ZNF818PQ6ZRF7 136 aa8.11□□□□□ -1.11
SS18L1-201ENST00000331758 PIPOXQ9P0Z9 390 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms