RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ZNF137PP52743 207 aa12.98□□□□□ -0.33
LRRC28-202ENST00000331450 MRPS10P82664 201 aaKnown RBP12.98□□□□□ -0.33
LRRC28-202ENST00000331450 IL18Q14116 193 aa12.98□□□□□ -0.33
LRRC28-202ENST00000331450 SIGLECL1Q8N7X8 197 aa12.98□□□□□ -0.33
LRRC28-202ENST00000331450 OR52I2Q8NH67 350 aa12.98□□□□□ -0.33
LRRC28-202ENST00000331450 SMIM4Q8WVI0 70 aa12.98□□□□□ -0.33
LRRC28-202ENST00000331450 ST6GALNAC6Q969X2 333 aa12.98□□□□□ -0.33
LRRC28-202ENST00000331450 CREB3L1Q96BA8 519 aa12.98□□□□□ -0.33
LRRC28-202ENST00000331450 MALSU1Q96EH3 234 aa12.98□□□□□ -0.33
LRRC28-202ENST00000331450 ABHD14AQ9BUJ0 271 aa12.98□□□□□ -0.33
LRRC28-202ENST00000331450 MEGF9Q9H1U4 602 aa12.98□□□□□ -0.33
LRRC28-202ENST00000331450 DPM3Q9P2X0 92 aa12.98□□□□□ -0.33
LRRC28-202ENST00000331450 AMMECR1Q9Y4X0 333 aaPredicted RBP12.98□□□□□ -0.33
LRRC28-202ENST00000331450 LEUTXA8MZ59 168 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 GABARAPH6UMI1 98 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 BET1O15155 118 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 HSPA12AO43301 675 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 CTXN2P0C2S0 81 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 RCVRNP35243 200 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 CEACAM6P40199 344 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 ETV6P41212 452 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 DGCR2P98153 550 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 ZNF79Q15937 498 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 Q6YL49 198 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 ODF3L1Q8IXM7 274 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 H1FOOQ8IZA3 346 aaPredicted RBP12.97□□□□□ -0.33
LRRC28-202ENST00000331450 OR5AP2Q8NGF4 316 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 OR10J5Q8NHC4 309 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 AGMATQ9BSE5 352 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 IFI27L2Q9H2X8 130 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 RDH8Q9NYR8 311 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 PTTG2Q9NZH5 202 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 MTFP1Q9UDX5 166 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 FAM96BQ9Y3D0 163 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 NF1P21359 2839 aa12.97□□□□□ -0.33
LRRC28-202ENST00000331450 FABP12A6NFH5 140 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 FCER2P06734 321 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 PAX6P26367 422 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 CEACAM3P40198 252 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 HILS1P60008 231 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 SSX2Q16385 188 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 RNASE12Q5GAN4 147 aaKnown RBP12.96□□□□□ -0.33
LRRC28-202ENST00000331450 TPTE2P1Q5T6R2 138 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 FAM131AQ6UXB0 335 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 LYSMD2Q8IV50 215 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 OR2AK2Q8NG84 335 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 OR10X1Q8NGY0 326 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 ZNF418Q8TF45 676 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-202ENST00000331450 EDARADDQ8WWZ3 215 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 C11orf54Q9H0W9 315 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-202ENST00000331450 OCEL1Q9H607 264 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 KLK11Q9UBX7 282 aa12.96□□□□□ -0.33
LRRC28-202ENST00000331450 RBMX2Q9Y388 322 aaKnown RBP12.96□□□□□ -0.33
LRRC28-202ENST00000331450 NIPBLQ6KC79 2804 aaeCLIP12.96□□□□□ -0.34
LRRC28-202ENST00000331450 VGLL3A8MV65 326 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 OOSP1A8MZH6 123 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 ST8SIA5O15466 376 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 GSTZ1O43708 216 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-202ENST00000331450 PTBP1P26599 531 aaKnown RBP eCLIP12.95□□□□□ -0.34
LRRC28-202ENST00000331450 ARPC4P59998 168 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 ACTBP60709 375 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 ACTG1P63261 375 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 SSBP1Q04837 148 aaKnown RBP12.95□□□□□ -0.34
LRRC28-202ENST00000331450 ZNF816Q0VGE8 651 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-202ENST00000331450 DIAPH2-AS1Q14236 149 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 CDK10Q15131 360 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 AANATQ16613 207 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 LINC00299Q6ZSB3 139 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 FAM216AQ8WUB2 273 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 FCAMRQ8WWV6 532 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 ESM1Q9NQ30 184 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 NECAP2Q9NVZ3 263 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 HILPDAQ9Y5L2 63 aa12.95□□□□□ -0.34
LRRC28-202ENST00000331450 A0A0A6YYJ9 748 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 A0A1W2PPI3 338 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 HSD17B6O14756 317 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 TUSC2O75896 110 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 IER3P46695 156 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 RAB7AP51149 207 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 DYNLT3P51808 116 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 TAS2R46P59540 309 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 OVCH2Q7RTZ1 564 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 PRIMA1Q86XR5 153 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 ZDHHC22Q8N966 263 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 TOMM40LQ969M1 308 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 ZNF251Q9BRH9 671 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 GINS4Q9BRT9 223 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 CUBNO60494 3623 aa12.94□□□□□ -0.34
LRRC28-202ENST00000331450 SAA2-SAA4A0A096LPE2 208 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 DNAJC9-AS1A6NH13 148 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 HOXA3O43365 443 aaPredicted RBP12.93□□□□□ -0.34
LRRC28-202ENST00000331450 TCF21O43680 179 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 LANCL1O43813 399 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 RBBP9O75884 186 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 IGHV4-59P01825 116 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 SAA2P0DJI9 122 aaPredicted RBP12.93□□□□□ -0.34
LRRC28-202ENST00000331450 NFYAP23511 347 aaPredicted RBP12.93□□□□□ -0.34
LRRC28-202ENST00000331450 IL3RAP26951 378 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 HABP2Q14520 560 aaPredicted RBP12.93□□□□□ -0.34
LRRC28-202ENST00000331450 LRRC75BQ2VPJ9 315 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms