RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 BANF2Q9H503 90 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 FAM60AQ9NP50 221 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 ARHGAP21Q5T5U3 1957 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 TRAPPC2LH3BP13 241 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 J3KRW8 73 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 MPIG6BO95866 241 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 CELA3BP08861 270 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 CTSEP14091 401 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 AMTP48728 403 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 HIST3H3Q16695 136 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 ODF3L1Q8IXM7 274 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 SLC22A24Q8N4F4 322 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 OR52N5Q8NH56 324 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 ST6GALNAC6Q969X2 333 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 SPACA5Q96QH8 159 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 SIGMAR1Q99720 223 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 C11orf1Q9H5F2 150 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 B3GALT1Q9Y5Z6 326 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 IGLV1-36A0A0B4J1U3 117 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 SSSCA1O60232 199 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 NUDT3O95989 172 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 HLA-DQA2P01906 255 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 OTX1P32242 354 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-201ENST00000328923 PLA2G5P39877 138 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 PIGPP57054 158 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 ZNF154Q13106 437 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 BVES-AS1Q5T3Y7 98 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 FNDC7Q5VTL7 733 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 ZNF776Q68DI1 518 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-201ENST00000328923 DGAT2L6Q6ZPD8 337 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 RERGQ96A58 199 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-201ENST00000328923 OR51B2Q9Y5P1 312 aa10.16□□□□□ -0.78
SHMT2-201ENST00000328923 LOC101059948A0A1B0GTJ6 334 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 A0A1W2PP11 408 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 PRSS37A4D1T9 235 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 TMEM14DPA8MWL7 114 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 HCRTR1O43613 425 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 ZNF737O75373 536 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 ZNF20P17024 532 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 DRD1P21728 446 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 TAS2R46P59540 309 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 HAPLN4Q86UW8 402 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 ARHGEF39Q8N4T4 335 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 OR2V2Q96R30 315 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 ZFYVE21Q9BQ24 234 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 PECRQ9BY49 303 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 PLEKHF2Q9H8W4 249 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 NPVFQ9HCQ7 196 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 IGKV1D-8A0A087WSZ0 117 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 GAGE10A6NGK3 116 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 P2RY10O00398 339 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 ZNF205O95201 554 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 YPEL3P61236 119 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-201ENST00000328923 MEF2BQ02080 365 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-201ENST00000328923 TESK1Q15569 626 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 TMEM177Q53S58 311 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 TMEM196Q5HYL7 178 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 PRSS41Q7RTY9 318 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 BCORP1Q8N888 145 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 OR4C3Q8NH37 302 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 KCNG3Q8TAE7 436 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 LIN37Q96GY3 246 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-201ENST00000328923 CFAP54Q96N23 3096 aa10.15□□□□□ -0.78
SHMT2-201ENST00000328923 C2orf72A6NCS6 295 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 IGLL1P15814 213 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 GATA2P23769 480 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-201ENST00000328923 NTSR1P30989 418 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 OPRM1P35372 400 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 LTBRP36941 435 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 RPS21P63220 83 aaKnown RBP10.14□□□□□ -0.79
SHMT2-201ENST00000328923 ZP4Q12836 540 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 NEGR1Q7Z3B1 354 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 C18orf12Q96KH6 178 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 CHRDL1Q9BU40 450 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 DERL1Q9BUN8 251 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 LRRC61Q9BV99 259 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 MRPL18Q9H0U6 180 aaKnown RBP10.14□□□□□ -0.79
SHMT2-201ENST00000328923 H0YGG7 62 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 BGLAPP02818 100 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 OR10J4P0C629 311 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 ARF3P61204 181 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-201ENST00000328923 STUMQ69YW2 141 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 TMEFF1Q8IYR6 380 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 SGMS2Q8NHU3 365 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 RTN4IP1Q8WWV3 396 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-201ENST00000328923 FAM131CQ96AQ9 280 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 EMC9Q9Y3B6 208 aa10.14□□□□□ -0.79
SHMT2-201ENST00000328923 ZNF878C9JN71 531 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 M0R1X1 148 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 IFNA1P01562 189 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 ECI1P42126 302 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 RPL27P61353 136 aaKnown RBP10.13□□□□□ -0.79
SHMT2-201ENST00000328923 PSG4Q00888 419 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 TCEA2Q15560 299 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 UFSP1Q6NVU6 142 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 MRPL30Q8TCC3 161 aaKnown RBP10.13□□□□□ -0.79
SHMT2-201ENST00000328923 MBD3L1Q8WWY6 194 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 FNDC4Q9H6D8 234 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-201ENST00000328923 NAA60Q9H7X0 242 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms