RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CTXND1A0A1B0GTU2 59 aa11.79□□□□□ -0.52
TRIM56-201ENST00000306085 GNRHR2Q96P88 292 aa11.79□□□□□ -0.52
TRIM56-201ENST00000306085 RAE1P78406 368 aaKnown RBP11.79□□□□□ -0.52
TRIM56-201ENST00000306085 WFIKKN1Q96NZ8 548 aa11.79□□□□□ -0.52
TRIM56-201ENST00000306085 PRSS27Q9BQR3 290 aa11.79□□□□□ -0.52
TRIM56-201ENST00000306085 ZFPL1O95159 310 aa11.79□□□□□ -0.52
TRIM56-201ENST00000306085 TRGC2P03986 189 aa11.79□□□□□ -0.52
TRIM56-201ENST00000306085 SKP2Q13309 424 aa11.79□□□□□ -0.52
TRIM56-201ENST00000306085 TOX2Q96NM4 488 aa11.79□□□□□ -0.52
TRIM56-201ENST00000306085 ZDHHC8Q9ULC8 765 aa11.79□□□□□ -0.52
TRIM56-201ENST00000306085 MMDQ15546 238 aa11.79□□□□□ -0.52
TRIM56-201ENST00000306085 PTPMT1Q8WUK0 201 aaPredicted RBP11.79□□□□□ -0.52
TRIM56-201ENST00000306085 NTMQ9P121 344 aa11.79□□□□□ -0.52
TRIM56-201ENST00000306085 HYPMO75409 117 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 PYCR3Q53H96 274 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 OR51M1Q9H341 326 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 NKX2-6A6NCS4 301 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 GALNT14Q96FL9 552 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 KNDC1Q76NI1 1749 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 A1L4Q6 167 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 CDK2AP2O75956 126 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 PRR7Q8TB68 274 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 OR2A4O95047 310 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 ZNF32P17041 273 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 ANKRD33Q7Z3H0 272 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 TEX29Q8N6K0 151 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 RND1Q92730 232 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 OR2A7Q96R45 310 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 NEU3Q9UQ49 428 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 NALCNQ8IZF0 1738 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 PITX3O75364 302 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 RCC1P18754 421 aaPredicted RBP11.78□□□□□ -0.52
TRIM56-201ENST00000306085 CX3CL1P78423 397 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 ZG16BQ96DA0 208 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 EDA2RQ9HAV5 297 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 TMIGD3P0DMS9 266 aaPredicted RBP11.78□□□□□ -0.52
TRIM56-201ENST00000306085 BIVMQ86UB2 503 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 FGF22Q9HCT0 170 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 COL14A1Q05707 1796 aaKnown RBP11.78□□□□□ -0.52
TRIM56-201ENST00000306085 HLA-DQA1P01909 254 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 CD3EP07766 207 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 BHLHA15Q7RTS1 189 aaPredicted RBP11.78□□□□□ -0.52
TRIM56-201ENST00000306085 PMCHL2Q9BQD1 86 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 MYF5P13349 255 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 MMP16P51512 607 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 RARRES2Q99969 163 aa11.78□□□□□ -0.52
TRIM56-201ENST00000306085 NDUFB4O95168 129 aa11.77□□□□□ -0.52
TRIM56-201ENST00000306085 GFERP55789 205 aa11.77□□□□□ -0.52
TRIM56-201ENST00000306085 OR2K2Q8NGT1 345 aa11.77□□□□□ -0.52
TRIM56-201ENST00000306085 LRRC37A3O60309 1634 aa11.77□□□□□ -0.52
TRIM56-201ENST00000306085 ST6GAL2Q96JF0 529 aa11.77□□□□□ -0.52
TRIM56-201ENST00000306085 KCNE5Q9UJ90 142 aa11.77□□□□□ -0.52
TRIM56-201ENST00000306085 WNT9BO14905 357 aa11.77□□□□□ -0.52
TRIM56-201ENST00000306085 CRYBB2P43320 205 aa11.77□□□□□ -0.52
TRIM56-201ENST00000306085 ASCL5Q7RTU5 278 aa11.77□□□□□ -0.52
TRIM56-201ENST00000306085 ZNF384Q8TF68 577 aa11.77□□□□□ -0.52
TRIM56-201ENST00000306085 BCL2P10415 239 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 SUMO3P55854 103 aaPredicted RBP11.77□□□□□ -0.53
TRIM56-201ENST00000306085 SRSF4Q08170 494 aaKnown RBP11.77□□□□□ -0.53
TRIM56-201ENST00000306085 ADAD2Q8NCV1 583 aaKnown RBP11.77□□□□□ -0.53
TRIM56-201ENST00000306085 FRRS1LQ9P0K9 344 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 HBBP68871 147 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 VN1R2Q8NFZ6 395 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 ARRDC1-AS1Q9H2J1 176 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 FOCADQ5VW36 1801 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 LINC00862A6NCI5 91 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 GDF9O60383 454 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 TMEM50BP56557 158 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 CTAG1AP78358 180 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 RNASEH2CQ8TDP1 164 aaKnown RBP11.77□□□□□ -0.53
TRIM56-201ENST00000306085 TOMM7Q9P0U1 55 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 TBX21Q9UL17 535 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 CCL7P80098 99 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 FXYD3Q14802 87 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 PTOV1Q86YD1 416 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 LURAP1LQ8IV03 231 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 EWSR1Q01844 656 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRIM56-201ENST00000306085 TMEM52BQ4KMG9 183 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 SH2D5Q6ZV89 423 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 FSCN3Q9NQT6 498 aa11.77□□□□□ -0.53
TRIM56-201ENST00000306085 RBMY1BA6NDE4 496 aaKnown RBP11.76□□□□□ -0.53
TRIM56-201ENST00000306085 RBMY1EA6NEQ0 496 aaKnown RBP11.76□□□□□ -0.53
TRIM56-201ENST00000306085 RBMY1DP0C7P1 496 aaKnown RBP11.76□□□□□ -0.53
TRIM56-201ENST00000306085 RBMY1A1P0DJD3 496 aaKnown RBP11.76□□□□□ -0.53
TRIM56-201ENST00000306085 RBMY1CP0DJD4 496 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 CA10Q9NS85 328 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 ZNF414Q96IQ9 312 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 J3QR06 171 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 PSG2P11465 335 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 SRIP30626 198 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 SLC52A3Q9NQ40 469 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 FLRT3Q9NZU0 649 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 CD300CQ08708 224 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 CCL4L1Q8NHW4 92 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 SAA1P0DJI8 122 aaPredicted RBP11.76□□□□□ -0.53
TRIM56-201ENST00000306085 SLC25A10Q9UBX3 287 aaPredicted RBP11.76□□□□□ -0.53
TRIM56-201ENST00000306085 FBXO46Q6PJ61 603 aaPredicted RBP11.76□□□□□ -0.53
TRIM56-201ENST00000306085 ZNF275Q9NSD4 429 aaPredicted RBP11.76□□□□□ -0.53
TRIM56-201ENST00000306085 CLDN16Q9Y5I7 305 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 GPX1P07203 203 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms