RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 AKR1E2Q96JD6 320 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 LURAP1Q96LR2 239 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 MAGT1Q9H0U3 335 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 ROS1P08922 2347 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 CHD8Q9HCK8 2581 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 SPTA1P02549 2419 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 KIAA1324LA8MWY0 1029 aaPredicted RBP5.46□□□□□ -1.54
USP47-201ENST00000305481 ABCD4O14678 606 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 PITX3O75364 302 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 PPP1CCP36873 323 aaKnown RBP5.46□□□□□ -1.54
USP47-201ENST00000305481 NKX2-1P43699 371 aaPredicted RBP5.46□□□□□ -1.54
USP47-201ENST00000305481 RPS23P62266 143 aaKnown RBP5.46□□□□□ -1.54
USP47-201ENST00000305481 BSPH1Q075Z2 132 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 ADIPOQQ15848 244 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 TMEM108Q6UXF1 575 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 OR1S2Q8NGQ3 325 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 RFESDQ8TAC1 157 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 GPR146Q96CH1 333 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 SEBOXQ9HB31 216 aaPredicted RBP5.46□□□□□ -1.54
USP47-201ENST00000305481 ZC4H2Q9NQZ6 224 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 KCNS2Q9ULS6 477 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 POLEQ07864 2286 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 A0A1B0GW55 424 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 DSCAMO60469 2012 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 NXPH3O95157 252 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 IGKV1-5P01602 117 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 DUX4L2P0CJ85 424 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 DUX4L3P0CJ86 424 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 DUX4L4P0CJ87 422 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 DUX4L5P0CJ88 424 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 DUX4L6P0CJ89 424 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 DUX4L7P0CJ90 424 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 PTAFRP25105 342 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 IL2RGP31785 369 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 BRWD1-AS2P59051 145 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 RPL30P62888 115 aaKnown RBP5.46□□□□□ -1.54
USP47-201ENST00000305481 EDDM3AQ14507 147 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 TUSC1Q2TAM9 212 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 MST1LQ2TV78 715 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 GPR157Q5UAW9 335 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 DUX4L9Q6RFH8 374 aaPredicted RBP5.46□□□□□ -1.54
USP47-201ENST00000305481 C16orf54Q6UWD8 224 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 ZNF295-AS1Q8N0V1 137 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 STPG2Q8N412 459 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 ARL11Q969Q4 196 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 WFIKKN1Q96NZ8 548 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 DNTTIP1Q9H147 329 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 DUX4Q9UBX2 424 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 IL19Q9UHD0 177 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 RNF115Q9Y4L5 304 aa5.46□□□□□ -1.54
USP47-201ENST00000305481 RBM7Q9Y580 266 aaKnown RBP5.46□□□□□ -1.54
USP47-201ENST00000305481 IGHV3-43A0A0B4J1X8 118 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 IGSF23A1L1A6 192 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 GPR137BO60478 399 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 GAPDHP04406 335 aaKnown RBP5.45□□□□□ -1.54
USP47-201ENST00000305481 SERPINE2P07093 398 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 IGHV3-43DP0DP04 118 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 CD80P33681 288 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 ASCL1P50553 236 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 TNFAIP6P98066 277 aaPredicted RBP5.45□□□□□ -1.54
USP47-201ENST00000305481 ZCCHC24Q8N2G6 241 aaKnown RBP5.45□□□□□ -1.54
USP47-201ENST00000305481 ARL6IP6Q8N6S5 226 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 ZNF645Q8N7E2 425 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 KDF1Q8NAX2 398 aaPredicted RBP5.45□□□□□ -1.54
USP47-201ENST00000305481 FAM222BQ8WU58 562 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 OR2D2Q9H210 308 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 ARV1Q9H2C2 271 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 ZFP57Q9NU63 452 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 ODAMA1E959 279 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 FAM24AA6NFZ4 105 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 DEFB108AA8MXU0 73 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 K7N7A8 449 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 SSSCA1O60232 199 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 RAMP3O60896 148 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 JTBO76095 146 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 CYB5R3P00387 301 aaPredicted RBP5.45□□□□□ -1.54
USP47-201ENST00000305481 S100GP29377 79 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 PAX9P55771 341 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 LINC00205P59089 165 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 CR1LQ2VPA4 569 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 UTF1Q5T230 341 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 CCDC28AQ8IWP9 274 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 UBAC2Q8NBM4 344 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 RNF141Q8WVD5 230 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 RND1Q92730 232 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 SNX22Q96L94 193 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 SPIN2AQ99865 258 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 SPIN2BQ9BPZ2 258 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 VKORC1Q9BQB6 163 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 AGMATQ9BSE5 352 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 USF3Q68DE3 2245 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 MGST3O14880 152 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 OR4A8P0C604 315 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 ZNF16P17020 682 aaPredicted RBP5.45□□□□□ -1.54
USP47-201ENST00000305481 EPHA1P21709 976 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 ZP3P21754 424 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 UCNP55089 124 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 EWSR1Q01844 656 aaKnown RBP eCLIP5.45□□□□□ -1.54
USP47-201ENST00000305481 OR2C3Q8N628 320 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 LPAR3Q9UBY5 353 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms