RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 A0A1W2PPC4 97 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 DEFA4P12838 97 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 PSMB3P49720 205 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 MRPS21P82921 87 aaKnown RBP9.26□□□□□ -0.93
ZNF558-201ENST00000301475 TRIM61Q5EBN2 209 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 TPTE2P1Q5T6R2 138 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 RHBDD2Q6NTF9 364 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 PCSK4Q6UW60 755 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 Q6ZWC4 215 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 SERPINE2P07093 398 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 IL6RP08887 468 aaPredicted RBP9.26□□□□□ -0.93
ZNF558-201ENST00000301475 BCL3P20749 454 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 LINC00310P59036 64 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 ESPL1Q14674 2120 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 BATFQ16520 125 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 TCF23Q7RTU1 214 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 TMEM144Q7Z5S9 345 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 ZIC4Q8N9L1 334 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 OR1F12Q8NHA8 337 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 C20orf144Q9BQM9 153 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 MANBALQ9NQG1 85 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 TP53TG3Q9ULZ0 132 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 TRAPPC1Q9Y5R8 145 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 GRIFINA4D1Z8 144 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 NPIPA2E9PIF3 369 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 NPIPA3F8WFD2 350 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 IGKV1-5P01602 117 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 SLC25A6P12236 298 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 EGR1P18146 543 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 TFPI2P48307 235 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 HBG1P69891 147 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 HBG2P69892 147 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 LCN2P80188 198 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 ANKRD39Q53RE8 183 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 SPANXN5Q5MJ07 72 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 TEX43Q6ZNM6 134 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 C20orf204Q6ZNR8 217 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 MRPL52Q86TS9 123 aaKnown RBP9.25□□□□□ -0.93
ZNF558-201ENST00000301475 MIEN1Q9BRT3 115 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 PARD6AQ9NPB6 346 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 FGF21Q9NSA1 209 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 PXMP4Q9Y6I8 212 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 ADAMTS20P59510 1910 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 A0A0U1RQK1 487 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 ZNF320A2RRD8 509 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 ZNF32P17041 273 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 CDKN1AP38936 164 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 ZDHHC23Q8IYP9 409 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 FADS6Q8N9I5 356 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 ZNF501Q96CX3 271 aaPredicted RBP9.25□□□□□ -0.93
ZNF558-201ENST00000301475 IMMP2LQ96T52 175 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 FGF23Q9GZV9 251 aaPredicted RBP9.25□□□□□ -0.93
ZNF558-201ENST00000301475 TMEM106BQ9NUM4 274 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 COLQQ9Y215 455 aaPredicted RBP9.25□□□□□ -0.93
ZNF558-201ENST00000301475 PAM16Q9Y3D7 125 aa9.25□□□□□ -0.93
ZNF558-201ENST00000301475 OR6C6A6NF89 314 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 MLNRO43193 412 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 PAGE4O60829 102 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 TNFSF13O75888 250 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 B4GALT1P15291 398 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 PPP1CBP62140 327 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 SLC38A11Q08AI6 406 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 TRA2AQ13595 282 aaKnown RBP eCLIP9.24□□□□□ -0.93
ZNF558-201ENST00000301475 OR5I1Q13606 314 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 OR8G2PQ6IF36 304 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 KCNIP4Q6PIL6 250 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 WDYHV1Q96HA8 205 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 OR2J1Q9GZK6 312 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 CRIM1Q9NZV1 1036 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 ATP23Q9Y6H3 246 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 USF3Q68DE3 2245 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 IGHV1OR21-1A0A087WYE8 117 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 PDGFBP01127 241 aaPredicted RBP9.24□□□□□ -0.93
ZNF558-201ENST00000301475 EDN3P14138 238 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 ADMP35318 185 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 LINC01551Q86U37 167 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 FGFBP3Q8TAT2 258 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 NEK7Q8TDX7 302 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 DTD1Q8TEA8 209 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 MMP17Q9ULZ9 603 aa9.24□□□□□ -0.93
ZNF558-201ENST00000301475 CTXND1A0A1B0GTU2 59 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 CD300LBA8K4G0 201 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 WNT2P09544 360 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 MYF5P13349 255 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 BMP5P22003 454 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 CD38P28907 300 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 NTF4P34130 210 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 SRSF7Q16629 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
ZNF558-201ENST00000301475 ZNF324BQ6AW86 544 aaPredicted RBP9.23□□□□□ -0.93
ZNF558-201ENST00000301475 CMTM2Q8TAZ6 248 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 ALKBH3Q96Q83 286 aaPredicted RBP9.23□□□□□ -0.93
ZNF558-201ENST00000301475 PARD6GQ9BYG4 376 aaPredicted RBP9.23□□□□□ -0.93
ZNF558-201ENST00000301475 ZNF816-ZNF321PA0A0X1KG74 233 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 KIR2DS1A0A191URI9 304 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 PGPEP1LA6NFU8 196 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 VENTXO95231 258 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 UMODP07911 640 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 C1QTNF9P0C862 333 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 MPLP40238 635 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 KIR2DS4P43632 304 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms