RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 TMEM56-RWDD3S4R434 201 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 ABCD4O14678 606 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 ST8SIA5O15466 376 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 RAMP3O60896 148 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 KRASP01116 189 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 IGKV1-39P01597 117 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 IGKV1D-39P04432 117 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 VDAC1P21796 283 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 PRDX2P32119 198 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 CD80P33681 288 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 TMEM267Q0VDI3 215 aaPredicted RBP12.22□□□□□ -0.45
SMG8-201ENST00000300917 SMIM21Q3B7S5 101 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 NINJ1Q92982 152 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 LEAP2Q969E1 77 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 SNRNP40Q96DI7 357 aaKnown RBP12.22□□□□□ -0.45
SMG8-201ENST00000300917 PLEKHA2Q9HB19 425 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 LRBAP50851 2863 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 MDH2P40926 338 aaKnown RBP12.22□□□□□ -0.45
SMG8-201ENST00000300917 SWI5Q1ZZU3 235 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 CABLES2Q9BTV7 478 aa12.22□□□□□ -0.45
SMG8-201ENST00000300917 A8MXE2 369 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 KRBOX1C9JBD0 128 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 GPR137BO60478 399 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 SRPXP78539 464 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 MST1LQ2TV78 715 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 LRRC46Q96FV0 321 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 MED9Q9NWA0 146 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 PSG11Q9UQ72 335 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 A0A1W2PPE3 182 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 H0Y980 276 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 JTBO76095 146 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 CCKARP32238 428 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 CCL8P80075 99 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 RUNX1Q01196 453 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 TBR1Q16650 682 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 SPINK9Q5DT21 86 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 NMSQ5H8A3 153 aa12.21□□□□□ -0.45
SMG8-201ENST00000300917 TMEM182Q6ZP80 229 aaPredicted RBP12.21□□□□□ -0.45
SMG8-201ENST00000300917 SPTBN1Q01082 2364 aaKnown RBP12.21□□□□□ -0.46
SMG8-201ENST00000300917 TRBV6-6A0A0A6YYG2 114 aa12.21□□□□□ -0.46
SMG8-201ENST00000300917 PRSS47A8MTI9 375 aa12.21□□□□□ -0.46
SMG8-201ENST00000300917 FGF16O43320 207 aa12.21□□□□□ -0.46
SMG8-201ENST00000300917 CYB5R3P00387 301 aaPredicted RBP12.21□□□□□ -0.46
SMG8-201ENST00000300917 HEXAP06865 529 aa12.21□□□□□ -0.46
SMG8-201ENST00000300917 SRSF7Q16629 238 aaKnown RBP eCLIP12.21□□□□□ -0.46
SMG8-201ENST00000300917 MBNL2Q5VZF2 373 aaKnown RBP12.21□□□□□ -0.46
SMG8-201ENST00000300917 GCSAMQ8N6F7 178 aa12.21□□□□□ -0.46
SMG8-201ENST00000300917 OR5C1Q8NGR4 320 aa12.21□□□□□ -0.46
SMG8-201ENST00000300917 TMEM171Q8WVE6 324 aa12.21□□□□□ -0.46
SMG8-201ENST00000300917 BOD1Q96IK1 185 aa12.21□□□□□ -0.46
SMG8-201ENST00000300917 HES4Q9HCC6 221 aa12.21□□□□□ -0.46
SMG8-201ENST00000300917 WIPI2Q9Y4P8 454 aa12.21□□□□□ -0.46
SMG8-201ENST00000300917 IGKV1D-17A0A075B6S4 117 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.2□□□□□ -0.46
SMG8-201ENST00000300917 PVALBP20472 110 aaPredicted RBP12.2□□□□□ -0.46
SMG8-201ENST00000300917 RND3P61587 244 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 RPL30P62888 115 aaKnown RBP12.2□□□□□ -0.46
SMG8-201ENST00000300917 UTF1Q5T230 341 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 FGFRL1Q8N441 504 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 SPIN2AQ99865 258 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 SPIN2BQ9BPZ2 258 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 IFT22Q9H7X7 185 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 MBNL3Q9NUK0 354 aaKnown RBP12.2□□□□□ -0.46
SMG8-201ENST00000300917 SPTAN1Q13813 2472 aaKnown RBP12.2□□□□□ -0.46
SMG8-201ENST00000300917 TAAR5O14804 337 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 EIF3GO75821 320 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMG8-201ENST00000300917 TIMP3P35625 211 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 ADAM5Q6NVV9 412 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 TMEM252Q8N6L7 170 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 OR5D13Q8NGL4 314 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 ABHD14AQ9BUJ0 271 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 PIGMQ9H3S5 423 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 NUP50Q9UKX7 468 aa12.2□□□□□ -0.46
SMG8-201ENST00000300917 RBMXL2O75526 392 aaKnown RBP12.19□□□□□ -0.46
SMG8-201ENST00000300917 G6PCP35575 357 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 DYNLT3P51808 116 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 HMGN3Q15651 99 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 GUCA2BQ16661 112 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 KRTCAP3Q53RY4 240 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 MOB1BQ7L9L4 216 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 C5orf30Q96GV9 206 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 BORCS7-ASMTA0A0B4J1R7 106 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 F8W036 122 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 TXNL1O43396 289 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 IGKV1-5P01602 117 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 HOXD4P09016 255 aaPredicted RBP12.19□□□□□ -0.46
SMG8-201ENST00000300917 P2RY1P47900 373 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 BLOC1S1P78537 153 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 Q3ZCU0 254 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 ZNF585BQ52M93 769 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 TCTEX1D2Q8WW35 142 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 MEGF10Q96KG7 1140 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 TSNAXQ99598 290 aaKnown RBP12.19□□□□□ -0.46
SMG8-201ENST00000300917 SFXN3Q9BWM7 321 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 GNG12Q9UBI6 72 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 CD40P25942 277 aa12.19□□□□□ -0.46
SMG8-201ENST00000300917 EIF5AP63241 154 aaKnown RBP12.19□□□□□ -0.46
SMG8-201ENST00000300917 TAGLNQ01995 201 aaKnown RBP12.19□□□□□ -0.46
SMG8-201ENST00000300917 EIF5AL1Q6IS14 154 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms