RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 CCL20P78556 96 aa11.5□□□□□ -0.57
CDH8-201ENST00000299345 ZNF816Q0VGE8 651 aaPredicted RBP11.5□□□□□ -0.57
CDH8-201ENST00000299345 LCN15Q6UWW0 184 aa11.5□□□□□ -0.57
CDH8-201ENST00000299345 RFESDQ8TAC1 157 aa11.5□□□□□ -0.57
CDH8-201ENST00000299345 GNG13Q9P2W3 67 aa11.5□□□□□ -0.57
CDH8-201ENST00000299345 SLC25A6P12236 298 aa11.5□□□□□ -0.57
CDH8-201ENST00000299345 SMIM21Q3B7S5 101 aa11.5□□□□□ -0.57
CDH8-201ENST00000299345 RBMXL1Q96E39 390 aaKnown RBP11.5□□□□□ -0.57
CDH8-201ENST00000299345 SMDT1Q9H4I9 107 aa11.5□□□□□ -0.57
CDH8-201ENST00000299345 PTAFRP25105 342 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 RHEBQ15382 184 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 Q6ZRM9 215 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 FAM24BQ8N5W8 94 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 C9orf106Q8NAJ2 232 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 A0A1W2PPH5 198 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 OOEPA6NGQ2 149 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 ZFP92A6NM28 416 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 PRR33A8MZF0 331 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 ERVK11-1P61568 191 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 FGFRL1Q8N441 504 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 OR52L2PQ8NGH6 319 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 NIPSNAP3BQ9BS92 247 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 COLCA2A8K830 154 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 NPIPB11E5RHQ5 1161 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 S100A9P06702 114 aaKnown RBP11.49□□□□□ -0.57
CDH8-201ENST00000299345 MZT1Q08AG7 82 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 IQCF2Q8IXL9 164 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 TPRX1Q8N7U7 411 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 RSG1Q9BU20 258 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 C11orf1Q9H5F2 150 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 RNF115Q9Y4L5 304 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 WDFY3Q8IZQ1 3526 aa11.49□□□□□ -0.57
CDH8-201ENST00000299345 MED12LQ86YW9 2145 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 PSPNO60542 156 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 OR2C1O95371 312 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 IGHG3P01860 377 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 HBZP02008 142 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 TAGLN2P37802 199 aaKnown RBP11.48□□□□□ -0.57
CDH8-201ENST00000299345 PAX9P55771 341 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 ZADH2Q8N4Q0 377 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 CEP250Q9BV73 2442 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 A0A1W2PPE2 198 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 FAM157AC9JC47 383 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 C12orf77C9JDV5 145 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 SPINT2O43291 252 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 KIR2DL2P43627 348 aaPredicted RBP11.48□□□□□ -0.57
CDH8-201ENST00000299345 ELLP55199 621 aaPredicted RBP11.48□□□□□ -0.57
CDH8-201ENST00000299345 HIST1H2BAQ96A08 127 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 IGHV3-43A0A0B4J1X8 118 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 AQP7O14520 342 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 IGKV1-5P01602 117 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 CECR9P0C854 216 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 IGHV3-43DP0DP04 118 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 ZNF561Q8N587 486 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 ZNF610Q8N9Z0 462 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 OR2Z1Q8NG97 314 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 GNG12Q9UBI6 72 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 WIPI2Q9Y4P8 454 aa11.48□□□□□ -0.57
CDH8-201ENST00000299345 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.47□□□□□ -0.57
CDH8-201ENST00000299345 ZNF787Q6DD87 383 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 LRRC29Q8WV35 223 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 MBNL3Q9NUK0 354 aaKnown RBP11.47□□□□□ -0.57
CDH8-201ENST00000299345 RIF1Q5UIP0 2472 aaKnown RBP11.47□□□□□ -0.57
CDH8-201ENST00000299345 DEFB108AA8MXU0 73 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 G6PCP35575 357 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 RAB11AP62491 216 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 VHLLQ6RSH7 139 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 BTNL3Q6UXE8 466 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 ZNF429Q86V71 674 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 LINC00518Q8N0U6 118 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 ZNF645Q8N7E2 425 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 ZBTB34Q8NCN2 500 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 PPP1R35Q8TAP8 253 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 OPN3Q9H1Y3 402 aaPredicted RBP11.47□□□□□ -0.57
CDH8-201ENST00000299345 MMP24Q9Y5R2 645 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 FREM2Q5SZK8 3169 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 ESPL1Q14674 2120 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 CEBPZOSA8MTT3 80 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 IGKV1-39P01597 117 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 IGKV1D-39P04432 117 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 HOXA1P49639 335 aaPredicted RBP11.47□□□□□ -0.57
CDH8-201ENST00000299345 OR2B8PP59922 312 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 SNRPEP62304 92 aaKnown RBP11.47□□□□□ -0.57
CDH8-201ENST00000299345 SLC38A11Q08AI6 406 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 FOXF2Q12947 444 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 H2BFWTQ7Z2G1 175 aa11.47□□□□□ -0.57
CDH8-201ENST00000299345 UBE2L5PA0A1B0GUS4 154 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 hCG_1809904A0A1W2PP81 198 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 A0A1W2PR64 198 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 A0A1W2PRV1 198 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 H3BQ15 152 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 MLNRO43193 412 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 TFF1P04155 84 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 COL10A1Q03692 680 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 PRR14LQ5THK1 2151 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 SLC35E4Q6ICL7 350 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 KDF1Q8NAX2 398 aaPredicted RBP11.46□□□□□ -0.57
CDH8-201ENST00000299345 PLPPR2Q96GM1 343 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 GVINP1Q7Z2Y8 2422 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 OR5H1A6NKK0 313 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms