RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 CD3EP07766 207 aa18.94■□□□□ 0.62
VSTM4-201ENST00000298454 ZNF16P17020 682 aaPredicted RBP18.94■□□□□ 0.62
VSTM4-201ENST00000298454 VDAC1P21796 283 aa18.94■□□□□ 0.62
VSTM4-201ENST00000298454 TRAT1Q6PIZ9 186 aa18.94■□□□□ 0.62
VSTM4-201ENST00000298454 ZNF645Q8N7E2 425 aa18.94■□□□□ 0.62
VSTM4-201ENST00000298454 IL22RA2Q969J5 263 aa18.94■□□□□ 0.62
VSTM4-201ENST00000298454 SDSLQ96GA7 329 aa18.94■□□□□ 0.62
VSTM4-201ENST00000298454 C5orf30Q96GV9 206 aa18.94■□□□□ 0.62
VSTM4-201ENST00000298454 CCL13Q99616 98 aa18.94■□□□□ 0.62
VSTM4-201ENST00000298454 SAP30LQ9HAJ7 183 aa18.94■□□□□ 0.62
VSTM4-201ENST00000298454 NMBP08949 121 aa18.93■□□□□ 0.62
VSTM4-201ENST00000298454 WNT2P09544 360 aa18.93■□□□□ 0.62
VSTM4-201ENST00000298454 GZMHP20718 246 aa18.93■□□□□ 0.62
VSTM4-201ENST00000298454 CA5BP1Q8WTZ4 195 aa18.93■□□□□ 0.62
VSTM4-201ENST00000298454 GAFA1Q96PS6 74 aa18.93■□□□□ 0.62
VSTM4-201ENST00000298454 CACNA1AO00555 2505 aa18.93■□□□□ 0.62
VSTM4-201ENST00000298454 DUXBA0A1W2PPF3 345 aa18.93■□□□□ 0.62
VSTM4-201ENST00000298454 ST8SIA3O43173 380 aa18.93■□□□□ 0.62
VSTM4-201ENST00000298454 RPL12P30050 165 aaKnown RBP18.93■□□□□ 0.62
VSTM4-201ENST00000298454 ESCO2Q56NI9 601 aa18.93■□□□□ 0.62
VSTM4-201ENST00000298454 FAM74A1Q5RGS3 127 aa18.93■□□□□ 0.62
VSTM4-201ENST00000298454 ZNF808Q8N4W9 903 aaPredicted RBP18.93■□□□□ 0.62
VSTM4-201ENST00000298454 DYSFO75923 2080 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 A0A0G2JRQ6 117 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 TUBAL3A6NHL2 446 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 HTD2P86397 168 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 CR1LQ2VPA4 569 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 FAM209AQ5JX71 171 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 TEX36Q5VZQ5 186 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 FAM216BQ8N7L0 139 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 ZC4H2Q9NQZ6 224 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 DSCAMO60469 2012 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 MED19A0JLT2 244 aaPredicted RBP18.92■□□□□ 0.62
VSTM4-201ENST00000298454 SIAH2O43255 324 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 IGKV1-39P01597 117 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 IGKV1D-39P04432 117 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 MST1LQ2TV78 715 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 SPIN2AQ99865 258 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 SPIN2BQ9BPZ2 258 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 ZNF665Q9H7R5 613 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 RCL1Q9Y2P8 373 aaKnown RBP18.92■□□□□ 0.62
VSTM4-201ENST00000298454 AUP1Q9Y679 476 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 POMT1Q9Y6A1 747 aa18.92■□□□□ 0.62
VSTM4-201ENST00000298454 E5RGE8 158 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 MUC1P15941 1255 aaPredicted RBP18.91■□□□□ 0.62
VSTM4-201ENST00000298454 APOBEC3AP31941 199 aaPredicted RBP18.91■□□□□ 0.62
VSTM4-201ENST00000298454 ZNF585BQ52M93 769 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 ZNF788Q6ZQV5 615 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 CXorf58Q96LI9 332 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 EGLN1Q9GZT9 426 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 PLEKHF2Q9H8W4 249 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 DYNLRB1Q9NP97 96 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 NSG2Q9Y328 171 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 NBASA2RRP1 2371 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 CLEC18AA5D8T8 446 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 LRRC30A6NM36 301 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 OMGP23515 440 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 CXorf66Q5JRM2 361 aaPredicted RBP18.91■□□□□ 0.62
VSTM4-201ENST00000298454 CLEC18CQ8NCF0 446 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 DMBX1Q8NFW5 382 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 C14orf79Q96F83 325 aa18.91■□□□□ 0.62
VSTM4-201ENST00000298454 LIN7CQ9NUP9 197 aaKnown RBP18.91■□□□□ 0.62
VSTM4-201ENST00000298454 ST8SIA5O15466 376 aa18.9■□□□□ 0.62
VSTM4-201ENST00000298454 NKX2-1P43699 371 aaPredicted RBP18.9■□□□□ 0.62
VSTM4-201ENST00000298454 THOC7Q6I9Y2 204 aaKnown RBP18.9■□□□□ 0.62
VSTM4-201ENST00000298454 COMMD7Q86VX2 200 aa18.9■□□□□ 0.62
VSTM4-201ENST00000298454 STOML3Q8TAV4 291 aa18.9■□□□□ 0.62
VSTM4-201ENST00000298454 ABHD14BQ96IU4 210 aa18.9■□□□□ 0.62
VSTM4-201ENST00000298454 ZFP57Q9NU63 452 aa18.9■□□□□ 0.62
VSTM4-201ENST00000298454 RAI1Q7Z5J4 1906 aaPredicted RBP18.9■□□□□ 0.62
VSTM4-201ENST00000298454 NXPH3O95157 252 aa18.89■□□□□ 0.62
VSTM4-201ENST00000298454 RPL30P62888 115 aaKnown RBP18.89■□□□□ 0.62
VSTM4-201ENST00000298454 IZUMO4Q1ZYL8 232 aa18.89■□□□□ 0.62
VSTM4-201ENST00000298454 CLEC9AQ6UXN8 241 aa18.89■□□□□ 0.62
VSTM4-201ENST00000298454 FGFRL1Q8N441 504 aa18.89■□□□□ 0.62
VSTM4-201ENST00000298454 CCL17Q92583 94 aa18.89■□□□□ 0.62
VSTM4-201ENST00000298454 GPR146Q96CH1 333 aa18.89■□□□□ 0.62
VSTM4-201ENST00000298454 KCNJ16Q9NPI9 418 aa18.89■□□□□ 0.62
VSTM4-201ENST00000298454 CISD1Q9NZ45 108 aaKnown RBP18.89■□□□□ 0.62
VSTM4-201ENST00000298454 OR6C3Q9NZP0 311 aa18.89■□□□□ 0.62
VSTM4-201ENST00000298454 PSG11Q9UQ72 335 aa18.89■□□□□ 0.62
VSTM4-201ENST00000298454 RNF115Q9Y4L5 304 aa18.89■□□□□ 0.62
VSTM4-201ENST00000298454 TPT1P13693 172 aaKnown RBP18.89■□□□□ 0.61
VSTM4-201ENST00000298454 EPHA1P21709 976 aa18.89■□□□□ 0.61
VSTM4-201ENST00000298454 POLR2GP62487 172 aaKnown RBP eCLIP18.89■□□□□ 0.61
VSTM4-201ENST00000298454 EIF4EBP1Q13541 118 aaPredicted RBP18.89■□□□□ 0.61
VSTM4-201ENST00000298454 BTNL3Q6UXE8 466 aa18.89■□□□□ 0.61
VSTM4-201ENST00000298454 ZBTB34Q8NCN2 500 aa18.89■□□□□ 0.61
VSTM4-201ENST00000298454 PHYHIPLQ96FC7 376 aa18.89■□□□□ 0.61
VSTM4-201ENST00000298454 AGMATQ9BSE5 352 aa18.89■□□□□ 0.61
VSTM4-201ENST00000298454 PLEKHA2Q9HB19 425 aa18.89■□□□□ 0.61
VSTM4-201ENST00000298454 GNG12Q9UBI6 72 aa18.89■□□□□ 0.61
VSTM4-201ENST00000298454 COL6A6A6NMZ7 2263 aa18.89■□□□□ 0.61
VSTM4-201ENST00000298454 MAGT1Q9H0U3 335 aa18.88■□□□□ 0.61
VSTM4-201ENST00000298454 CALYQ9NYX4 217 aa18.88■□□□□ 0.61
VSTM4-201ENST00000298454 TMEM178BH3BS89 294 aa18.88■□□□□ 0.61
VSTM4-201ENST00000298454 SIGLEC5O15389 551 aa18.88■□□□□ 0.61
VSTM4-201ENST00000298454 TMPRSS2O15393 492 aa18.88■□□□□ 0.61
VSTM4-201ENST00000298454 IGHV3-7P01780 117 aa18.88■□□□□ 0.61
VSTM4-201ENST00000298454 CGB3P0DN86 165 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms