RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TMEM167BQ9NRX6 74 aa15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 FBXL17Q9UF56 701 aa15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 ZFC3H1O60293 1989 aaKnown RBP15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 SNCGO76070 127 aa15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 KRTDAPP60985 99 aa15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 NRN1LQ496H8 165 aa15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 ZNF66Q6ZN08 573 aa15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 TCTEX1D1Q8N7M0 179 aa15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 LIPFP07098 398 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 TMEM30BQ3MIR4 351 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 NEU4Q8WWR8 484 aaPredicted RBP15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 A0A0G2JMM0 328 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 A0A1W2PPB8 328 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 A0A1W2PRS3 328 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 KIR3DP1A8MWS1 328 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 TCAPO15273 167 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 LINC00271P0C7V0 271 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 Q1RN00 199 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 BVESQ8NE79 360 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 RNASE6Q93091 150 aaKnown RBP15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 PARP11Q9NR21 331 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 CALYQ9NYX4 217 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 IDI2-AS1Q9NZ38 188 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 INTS1Q8N201 2190 aaKnown RBP15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 GPR179Q6PRD1 2367 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 HLA-GP17693 338 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 ARF6P62330 175 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 PDPNQ86YL7 162 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 AICDAQ9GZX7 198 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 MIXL1Q9H2W2 232 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 FLVCR1-AS1Q8TAF5 88 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 WDYHV1Q96HA8 205 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 RBM38Q9H0Z9 239 aaKnown RBP15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 LPAR5Q9H1C0 372 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 ZDHHC11Q9H8X9 412 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 WASHC3Q9Y3C0 194 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 IGKV3-7A0A075B6H7 116 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 PSG2P11465 335 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 C1orf100Q5SVJ3 147 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 TMEM88Q6PEY1 159 aa15.24■□□□□ 0.03
CDC42EP3-201ENST00000295324 DOCK6Q96HP0 2047 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 A0A1W2PPQ1 181 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 PTGDSP41222 190 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 RABAC1Q9UI14 185 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 OR51B2Q9Y5P1 312 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 LOC390937A0A1W2PQ73 354 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 CECR9P0C854 216 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 APELAP0DMC3 54 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 MIDNQ504T8 468 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 DLL3Q9NYJ7 618 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 NAGKQ9UJ70 344 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 RALYQ9UKM9 306 aaKnown RBP15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 AANATQ16613 207 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 CLEC12BQ2HXU8 276 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 C17orf82Q86X59 251 aaPredicted RBP15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 GHITMQ9H3K2 345 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 KLF7O75840 302 aaPredicted RBP15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 SCO1O75880 301 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 TMEM33P57088 247 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 MMP24Q9Y5R2 645 aa15.23■□□□□ 0.03
CDC42EP3-201ENST00000295324 PHOX2AO14813 284 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 RAMP1O60894 148 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 PF4V1P10720 104 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 MMD2Q8IY49 270 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 MRPL24Q96A35 216 aaKnown RBP15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 ZMAT5Q9UDW3 170 aaKnown RBP15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 F5H697 171 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 SMAD7O15105 426 aaKnown RBP15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 LOXL3P58215 753 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 TPPP2P59282 170 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 LY6DQ14210 128 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 SLC25A53Q5H9E4 307 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 DCAF12L2Q5VW00 463 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 ATP5SQ99766 215 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 MUC1P15941 1255 aaPredicted RBP15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 USF1P22415 310 aaPredicted RBP15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 DYNLT3P51808 116 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 LINC01590Q5TEZ4 76 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 OR9G1Q8NH87 305 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 P2RX4Q99571 388 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 KLK13Q9UKR3 277 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 CALHM1Q8IU99 346 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 OR4C5Q8NGB2 326 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 V9GYH0 126 aa15.22■□□□□ 0.03
CDC42EP3-201ENST00000295324 ZNF716A6NP11 495 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 GUK1Q16774 197 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 PCSK4Q6UW60 755 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 STXBP6Q8NFX7 210 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 A0A1W2PP11 408 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 C19orf67A6NJJ6 358 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 PTBP3O95758 552 aaKnown RBP15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 GAMTQ14353 236 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 OR1L1Q8NH94 360 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 IGHV3-72A0A0B4J1Y9 119 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 NKX2-6A6NCS4 301 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 ZNF729A6NN14 1252 aaPredicted RBP15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 VAX1Q5SQQ9 334 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 C19orf35Q6ZS72 473 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 LYZL2Q7Z4W2 148 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 C11orf42Q8N5U0 333 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms