RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CRYBA2P53672 197 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 PILRAQ9UKJ1 303 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 ZNF236Q9UL36 1845 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 hADV38S2A0JD32 116 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 PPIHO43447 177 aaKnown RBP13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 OTX1P32242 354 aaPredicted RBP13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 OIT3Q8WWZ8 545 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 PARD6GQ9BYG4 376 aaPredicted RBP13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 SEBOXQ9HB31 216 aaPredicted RBP13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 CDX1P47902 265 aaPredicted RBP13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 HFEQ30201 348 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 FDX2Q6P4F2 183 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 A6NDN8 102 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 GCGP01275 180 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 TMEM116Q8NCL8 245 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 MS4A18H0YCH9 400 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 GREM1O60565 184 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 RND3P61587 244 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 MS4A18Q3C1V0 323 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 SELENOHQ8IZQ5 122 aaKnown RBP13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 ZNF738Q8NE65 137 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 TP53RKQ96S44 253 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 PCOLCE2Q9UKZ9 415 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 TCFL5Q9UL49 500 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 IGKV1D-42A0A075B6H8 117 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 AQP10Q96PS8 301 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 FAM206AQ9NX38 181 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 FAM90A27PA6NNH2 459 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 WDR74Q6RFH5 385 aaPredicted RBP13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 TEPPQ6URK8 271 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 UNQ9370/PRO34162Q6UXP9 181 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 PRNTQ86SH4 94 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 OR2J1Q9GZK6 312 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 AKIRIN1Q9H9L7 192 aaPredicted RBP13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 TMEM74BQ9NUR3 256 aa13.29□□□□□ -0.28
SHROOM4-201ENST00000289292 LINC00587B1AMM8 73 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 OR8I2Q8N0Y5 310 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 OR51B2Q9Y5P1 312 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 SCN4AP35499 1836 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 NMUP48645 174 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 ATOH7Q8N100 152 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 G6PC2Q9NQR9 355 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 NPTNQ9Y639 398 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 CD1BP29016 333 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 SRP14P37108 136 aaKnown RBP13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 ZP4Q12836 540 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 TRA2AQ13595 282 aaKnown RBP eCLIP13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 TNFRSF19Q9NS68 423 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 PXMP4Q9Y6I8 212 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 J3QT63 122 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 TMEM222Q9H0R3 208 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 WNT16Q9UBV4 365 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 SCN2AQ99250 2005 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 TSPAN2O60636 221 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 SMPD2O60906 423 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 GAPDHP04406 335 aaKnown RBP13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 ACP1P24666 158 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 FXYD3Q14802 87 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 OR5A2Q8NGI9 324 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 LHFPL6Q9Y693 200 aa13.28□□□□□ -0.28
SHROOM4-201ENST00000289292 SYNGR1O43759 233 aa13.27□□□□□ -0.28
SHROOM4-201ENST00000289292 IGHV4-34P06331 123 aa13.27□□□□□ -0.28
SHROOM4-201ENST00000289292 NPY1RP25929 384 aa13.27□□□□□ -0.28
SHROOM4-201ENST00000289292 BRS3P32247 399 aa13.27□□□□□ -0.28
SHROOM4-201ENST00000289292 WDFY1Q8IWB7 410 aa13.27□□□□□ -0.28
SHROOM4-201ENST00000289292 KCNK17Q96T54 332 aa13.27□□□□□ -0.28
SHROOM4-201ENST00000289292 A0A0J9YW62 118 aa13.27□□□□□ -0.28
SHROOM4-201ENST00000289292 GPR146Q96CH1 333 aa13.27□□□□□ -0.28
SHROOM4-201ENST00000289292 ORM1P02763 201 aa13.27□□□□□ -0.29
SHROOM4-201ENST00000289292 HIST1H1BP16401 226 aaKnown RBP13.27□□□□□ -0.29
SHROOM4-201ENST00000289292 FHL5Q5TD97 284 aa13.27□□□□□ -0.29
SHROOM4-201ENST00000289292 REC114Q7Z4M0 266 aa13.27□□□□□ -0.29
SHROOM4-201ENST00000289292 HSPB8Q9UJY1 196 aa13.27□□□□□ -0.29
SHROOM4-201ENST00000289292 OR2Y1Q8NGV0 311 aa13.27□□□□□ -0.29
SHROOM4-201ENST00000289292 CCDC88CQ9P219 2028 aa13.27□□□□□ -0.29
SHROOM4-201ENST00000289292 CNTRLQ7Z7A1 2325 aa13.27□□□□□ -0.29
SHROOM4-201ENST00000289292 CA2P00918 260 aa13.27□□□□□ -0.29
SHROOM4-201ENST00000289292 PAFAH1B2P68402 229 aa13.27□□□□□ -0.29
SHROOM4-201ENST00000289292 KLK10O43240 276 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 PGLYRP1O75594 196 aaPredicted RBP13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 FCARP24071 287 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 MARVELD3Q96A59 401 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 GRIFINA4D1Z8 144 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 PLAUP00749 431 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 HSPB1P04792 205 aaKnown RBP13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 SPEM2Q0P670 501 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 HARBI1Q96MB7 349 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 COA4Q9NYJ1 87 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 PQLC2LA1A4F0 135 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 IGSF23A1L1A6 192 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 GOSR1O95249 250 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 ISG15P05161 165 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 CD40P25942 277 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 SCGB1D4Q6XE38 83 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 IGKV3-7A0A075B6H7 116 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 H0Y980 276 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 LINC01590Q5TEZ4 76 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 SMIM12Q96EX1 92 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 MSGN1A6NI15 193 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 RAB37Q96AX2 223 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms