RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 V9GYH0 126 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 PPIAL4CA0A0B4J2A2 164 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 CLDN34H7C241 214 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 HPXP02790 462 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 PPIAL4GP0DN37 164 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 OR4P4Q8NGL7 312 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 TMEM18Q96B42 140 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 ABHD14BQ96IU4 210 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 P2RX4Q99571 388 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 WNK3Q9BYP7 1800 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 TRBV5-5A0A0J9YX44 114 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 A1L4Q6 167 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 CELA3AP09093 270 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 SFTA3P0C7M3 94 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 SNAI3Q3KNW1 292 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 DGAT2L7PQ6IED9 249 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 FAM222BQ8WU58 562 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 PERPQ96FX8 193 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 SMPD2O60906 423 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 FGF8P55075 233 aaPredicted RBP15.98■□□□□ 0.15
PCDH1-201ENST00000287008 LOXL3P58215 753 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 MMD2Q8IY49 270 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 NAT8BQ9UHF3 227 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 OR51B2Q9Y5P1 312 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 IGHV1-69-2A0A0G2JMI3 117 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 C17orf51A8MQB3 221 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 SPCS3P61009 180 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 FAM27E3Q08E93 113 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 TEPPQ6URK8 271 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 KCNK7Q9Y2U2 307 aa15.98■□□□□ 0.15
PCDH1-201ENST00000287008 MBPP02686 304 aaPredicted RBP15.97■□□□□ 0.15
PCDH1-201ENST00000287008 STARD4Q96DR4 205 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 RCC2Q9P258 522 aaKnown RBP15.97■□□□□ 0.15
PCDH1-201ENST00000287008 CADP27708 2225 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 LEUTXA8MZ59 168 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 TPPP2P59282 170 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 RPL30P62888 115 aaKnown RBP15.97■□□□□ 0.15
PCDH1-201ENST00000287008 HOXA4Q00056 320 aaPredicted RBP15.97■□□□□ 0.15
PCDH1-201ENST00000287008 C10orf128Q5T292 105 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 ZNF66Q6ZN08 573 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 C11orf42Q8N5U0 333 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 OR1L6Q8NGR2 347 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 NOL4LQ96MY1 436 aaPredicted RBP15.97■□□□□ 0.15
PCDH1-201ENST00000287008 CALYQ9NYX4 217 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 CYB5R3P00387 301 aaPredicted RBP15.97■□□□□ 0.15
PCDH1-201ENST00000287008 HTN1P15515 57 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 ANKRD55Q3KP44 614 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 TCTEX1D1Q8N7M0 179 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 DLL3Q9NYJ7 618 aa15.97■□□□□ 0.15
PCDH1-201ENST00000287008 BRCA1P38398 1863 aaKnown RBP15.97■□□□□ 0.15
PCDH1-201ENST00000287008 C2CD4CQ8TF44 421 aa15.96■□□□□ 0.15
PCDH1-201ENST00000287008 ZNF426Q9BUY5 554 aa15.96■□□□□ 0.15
PCDH1-201ENST00000287008 FOXH1O75593 365 aa15.96■□□□□ 0.15
PCDH1-201ENST00000287008 CALHM1Q8IU99 346 aa15.96■□□□□ 0.15
PCDH1-201ENST00000287008 APOBEC3AP31941 199 aaPredicted RBP15.96■□□□□ 0.15
PCDH1-201ENST00000287008 C1orf100Q5SVJ3 147 aa15.96■□□□□ 0.15
PCDH1-201ENST00000287008 C10orf113Q5VZT2 155 aa15.96■□□□□ 0.15
PCDH1-201ENST00000287008 WFDC3Q8IUB2 231 aa15.96■□□□□ 0.15
PCDH1-201ENST00000287008 OR4D10Q8NGI6 311 aa15.96■□□□□ 0.15
PCDH1-201ENST00000287008 WASHC3Q9Y3C0 194 aa15.96■□□□□ 0.15
PCDH1-201ENST00000287008 SPINK4O60575 86 aa15.96■□□□□ 0.14
PCDH1-201ENST00000287008 CSRP3P50461 194 aa15.96■□□□□ 0.14
PCDH1-201ENST00000287008 TMEM50BP56557 158 aa15.96■□□□□ 0.14
PCDH1-201ENST00000287008 EGR4Q05215 589 aa15.96■□□□□ 0.14
PCDH1-201ENST00000287008 IGSF11Q5DX21 431 aa15.96■□□□□ 0.14
PCDH1-201ENST00000287008 VAX1Q5SQQ9 334 aa15.96■□□□□ 0.14
PCDH1-201ENST00000287008 CLEC9AQ6UXN8 241 aa15.96■□□□□ 0.14
PCDH1-201ENST00000287008 LILRB1Q8NHL6 650 aaPredicted RBP15.95■□□□□ 0.14
PCDH1-201ENST00000287008 NEURL2Q9BR09 285 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 TMPRSS5Q9H3S3 457 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 SIRT7Q9NRC8 400 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 C9orf172C9J069 976 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 VWA1Q6PCB0 445 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 FAM57AQ8TBR7 257 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 NXF2Q9GZY0 626 aaKnown RBP15.95■□□□□ 0.14
PCDH1-201ENST00000287008 OPN4Q9UHM6 478 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 NOTCH3Q9UM47 2321 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 ARHGEF17Q96PE2 2063 aaPredicted RBP15.95■□□□□ 0.14
PCDH1-201ENST00000287008 SLC24A4Q8NFF2 622 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 TMEM45BQ96B21 275 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 FAM206AQ9NX38 181 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 RAXQ9Y2V3 346 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 IGLV3-12A0A075B6K2 115 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 LOC105371242A0A075B767 164 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 IGHV3-21A0A0B4J1V1 117 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 SCTP09683 121 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 ZNF561Q8N587 486 aa15.95■□□□□ 0.14
PCDH1-201ENST00000287008 MYO7BQ6PIF6 2116 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 LIPFP07098 398 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 EWSR1Q01844 656 aaKnown RBP eCLIP15.94■□□□□ 0.14
PCDH1-201ENST00000287008 LINC00052Q96N35 136 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 PTGDSP41222 190 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 GALR1P47211 349 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 CCL19Q99731 98 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 MANBALQ9NQG1 85 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 ARL2-SNX15V9GYD0 113 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 PKDREJQ9NTG1 2253 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 AANATQ16613 207 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 ADAD2Q8NCV1 583 aaKnown RBP15.94■□□□□ 0.14
PCDH1-201ENST00000287008 METTL1Q9UBP6 276 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms