RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 SGPP2Q8IWX5 399 aa11□□□□□ -0.65
ACER3-201ENST00000278544 RHOFQ9HBH0 211 aa11□□□□□ -0.65
ACER3-201ENST00000278544 CLN8Q9UBY8 286 aa11□□□□□ -0.65
ACER3-201ENST00000278544 RP2O75695 350 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 SCGB1D2O95969 90 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 IGHV4-39P01824 125 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 PPOXP50336 477 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 LUMP51884 338 aaPredicted RBP10.99□□□□□ -0.65
ACER3-201ENST00000278544 C1QTNF12Q5T7M4 302 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 TEX36Q5VZQ5 186 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 PLSCR3Q9NRY6 295 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 ONECUT1Q9UBC0 465 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 UBE2J1Q9Y385 318 aaPredicted RBP10.99□□□□□ -0.65
ACER3-201ENST00000278544 TNCP24821 2201 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 DSCAML1Q8TD84 2053 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 H3BUI4 141 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 LYZL2Q7Z4W2 148 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 ZDHHC22Q8N966 263 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 TIMD4Q96H15 378 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 MYO9AB2RTY4 2548 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 TEX15Q9BXT5 2789 aa10.99□□□□□ -0.65
ACER3-201ENST00000278544 ZNF816Q0VGE8 651 aaPredicted RBP10.98□□□□□ -0.65
ACER3-201ENST00000278544 NLRC3Q7RTR2 1065 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 DTX2Q86UW9 622 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 H1FOOQ8IZA3 346 aaPredicted RBP10.98□□□□□ -0.65
ACER3-201ENST00000278544 LYG1Q8N1E2 194 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 OR5D13Q8NGL4 314 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 MTORP42345 2549 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 C15orf65H3BRN8 121 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 H7C1Q1 480 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 HMGN3Q15651 99 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 C17orf58Q2M2W7 97 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 C6orf183Q5T699 404 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 ZNF880Q6PDB4 577 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 ZBTB8BQ8NAP8 495 aaPredicted RBP10.98□□□□□ -0.65
ACER3-201ENST00000278544 RAB1CQ92928 201 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 PHB2Q99623 299 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 SUCNR1Q9BXA5 334 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 ITPR3Q14573 2671 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 SSTR2P30874 369 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 ZNF295-AS1Q8N0V1 137 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 C14orf79Q96F83 325 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 MED30Q96HR3 178 aa10.98□□□□□ -0.65
ACER3-201ENST00000278544 TANC2Q9HCD6 1990 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 SSX9Q7RTT3 188 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 LHFPL5Q8TAF8 219 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 ZFAND1Q8TCF1 268 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 FLNAP21333 2647 aaKnown RBP10.97□□□□□ -0.65
ACER3-201ENST00000278544 PRAF2O60831 178 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 GNB2P62879 340 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 DRAM1Q8N682 238 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 RNASE11Q8TAA1 199 aaKnown RBP10.97□□□□□ -0.65
ACER3-201ENST00000278544 ZNF436Q9C0F3 470 aaPredicted RBP10.97□□□□□ -0.65
ACER3-201ENST00000278544 DLL4Q9NR61 685 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 OR6C3Q9NZP0 311 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 FXYD6-FXYD2A0A087WZ82 144 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 IFNA2P01563 188 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 ANXA3P12429 323 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 GZMHP20718 246 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 TMEM268Q5VZI3 342 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 MOB1BQ7L9L4 216 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 CMTM1Q8IZ96 169 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 OR11H4Q8NGC9 324 aa10.97□□□□□ -0.65
ACER3-201ENST00000278544 ZNF469Q96JG9 3925 aaPredicted RBP10.96□□□□□ -0.65
ACER3-201ENST00000278544 hADV38S2A0JD32 116 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 MPPED1O15442 326 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 IGHV2-70P01814 119 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 IL5P05113 134 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 CTSDP07339 412 aaPredicted RBP10.96□□□□□ -0.65
ACER3-201ENST00000278544 DIAPH2-AS1Q14236 149 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 C1orf229Q6ZS94 237 aaPredicted RBP10.96□□□□□ -0.65
ACER3-201ENST00000278544 C5orf30Q96GV9 206 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 OR10C1Q96KK4 312 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 SCGB3A2Q96PL1 93 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 ABCA2Q9BZC7 2435 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 KBTBD11-OT1A0A1B0GTJ5 212 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 C22orf46C9J442 243 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 RAMP3O60896 148 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 SFT2D2O95562 160 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 F12P00748 615 aaPredicted RBP10.96□□□□□ -0.65
ACER3-201ENST00000278544 CTXN2P0C2S0 81 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 SULT1A3P0DMM9 295 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 SULT1A4P0DMN0 295 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 EFNA4P52798 201 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 S100A10P60903 97 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 RPL30P62888 115 aaKnown RBP10.96□□□□□ -0.65
ACER3-201ENST00000278544 CD276Q5ZPR3 534 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 ZNF714Q96N38 554 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 NAA60Q9H7X0 242 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 KCNIP3Q9Y2W7 256 aa10.96□□□□□ -0.65
ACER3-201ENST00000278544 SETD2Q9BYW2 2564 aaPredicted RBP10.96□□□□□ -0.66
ACER3-201ENST00000278544 IGHV3OR16-10A0A075B7F0 116 aa10.96□□□□□ -0.66
ACER3-201ENST00000278544 IGHV3-72A0A0B4J1Y9 119 aa10.96□□□□□ -0.66
ACER3-201ENST00000278544 GPR31O00270 319 aa10.96□□□□□ -0.66
ACER3-201ENST00000278544 PGLYRP1O75594 196 aaPredicted RBP10.96□□□□□ -0.66
ACER3-201ENST00000278544 SHEQ5VZ18 495 aa10.96□□□□□ -0.66
ACER3-201ENST00000278544 VKORC1L1Q8N0U8 176 aa10.96□□□□□ -0.66
ACER3-201ENST00000278544 GLYATL2Q8WU03 294 aa10.96□□□□□ -0.66
ACER3-201ENST00000278544 TCTEX1D2Q8WW35 142 aa10.96□□□□□ -0.66
ACER3-201ENST00000278544 DEDD2Q8WXF8 326 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms